Microbacterium sp. UCD-TDU

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. UCD-TDU is a rod-shaped bacterium characterized by a single replicon. This structural feature is significant as it typically indicates a streamlined genome organization, which can be associated with specific ecological niches or adaptive strategies. The bacterium is cataloged under the accession number AOSO00000000.1, which allows for its identification and retrieval in genomic databases, facilitating further research and comparison with related microbial species. Rod-shaped bacteria, such as Microbacterium sp. UCD-TDU, are known for their diverse ecological roles, often found in soil and water environments. Their morphology can influence their motility and nutrient absorption, which may contribute to their adaptability in various habitats. Understanding the traits of Microbacterium sp. UCD-TDU can provide insights into its potential applications in biotechnology or environmental microbiology. For instance, rod-shaped bacteria often play crucial roles in nutrient cycling and organic matter decomposition, suggesting that Microbacterium sp. UCD-TDU may contribute to soil health and ecosystem functioning. In summary, the rod shape and single replicon of Microbacterium sp. UCD-TDU highlight its potential adaptability and ecological significance, warranting further investigation into its functional roles in natural environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. UCD-TDU
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. UCD-TDU


Gene Summary

Adenine Count

590359 bp

Thymine Count

594475 bp

Guanine Count

1282724 bp

Cytosine Count

1278289 bp

Genome Length

3745877 bp

Protein-coding Genes

3532 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive430267 - 430278Not Available
Major capsid proteinD514_0102150Not AvailableNegative431603 - 43249332190.9
Gp39D514_0102155Not AvailableNegative432541 - 43302317848.5
Minor capsid proteinD514_0102160Not AvailableNegative433091 - 43384926900.0
Portal proteinD514_0102165Not AvailableNegative433833 - 43515249201.0
Terminase large subunitD514_0102170Not AvailableNegative435152 - 43692165771.3
Terminase small subunitD514_0102175Not AvailableNegative436905 - 43727313023.5
Hnh endonucleaseD514_0102185Not AvailableNegative437604 - 43790611391.2
Putative hiran domain-containing proteinD514_0102190Not AvailablePositive437998 - 43832111756.2
Hnh endonucleaseD514_0102205Not AvailableNegative438623 - 43895512256.3

Displaying genes 1 – 10 of 3640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.