Ruminiclostridium cellobioparum subsp. termitidis CT1112

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminiclostridium

Description

Ruminiclostridium cellobioparum subsp. termitidis CT1112 is a Gram-negative, anaerobic bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genetic organization. The bacterium is cataloged under the accession number AORV00000000.1, providing a reference for further studies and genomic exploration. As an anaerobic organism, R. cellobioparum subsp. termitidis CT1112 thrives in environments devoid of oxygen, which is a common characteristic of many gut microbiota, particularly those associated with herbivorous hosts. This ecological niche suggests that the bacterium may play a significant role in the breakdown of complex carbohydrates, such as cellulose, which is abundant in the plant material consumed by its hosts. The specific association of this subspecies with termite digestive systems implies that it may contribute to the efficient degradation of lignocellulosic biomass, facilitating nutrient acquisition for the host. Understanding the metabolic capabilities and ecological roles of R. cellobioparum subsp. termitidis CT1112 could provide insights into the symbiotic relationships within termite colonies and their broader impact on nutrient cycling in ecosystems where they are prevalent.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminiclostridium
SpeciesRuminiclostridium cellobioparum
Strainsubsp. termitidis CT1112

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminiclostridium cellobioparum subsp. termitidis CT1112

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5256 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydroxy-acid dehydrataseCTER_4178Not AvailableNegative245667 - 24732558213.7
colicin v production proteinCTER_4179Not AvailableNegative247681 - 24838826112.8
hypothetical proteinCTER_4180Not AvailableNegative248406 - 24959643791.7
putative membrane proteinCTER_4181Not AvailableNegative249793 - 25088739686.1
hypothetical proteinCTER_4182Not AvailableNegative251008 - 25240851475.9
abc-type uncharacterized transport systemCTER_4183Not AvailableNegative252412 - 25381251713.8
hypothetical proteinCTER_4184Not AvailableNegative253834 - 2540819078.41
hypothetical proteinCTER_5118Not AvailableNegative267807 - 2680529841.62
hypothetical proteinCTER_5119Not AvailableNegative268103 - 26841411905.5
ribbon-helix-helix protein, copg familyCTER_5120Not AvailablePositive268534 - 2687166939.38

Displaying genes 261 – 270 of 5362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 269 metabolites

Health Effects

No health effects information available for this bacterium.