Paramagnetospirillum caucaseum strain SO-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Magnetospirillaceae

Genus

Paramagnetospirillum

Description

Paramagnetospirillum caucaseum strain SO-1 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates its motility in aquatic environments. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession number AONQ00000000.1, which provides a reference for researchers seeking to explore its genetic and metabolic pathways further. The presence of flagella suggests that P. caucaseum strain SO-1 may engage in chemotaxis, allowing it to navigate towards favorable conditions or away from harmful environments, which is a common trait among motile bacteria. In terms of ecological implications, the motility conferred by flagella likely enhances the strain's ability to colonize diverse habitats, potentially contributing to biogeochemical cycles in aquatic ecosystems. The single replicon suggests a streamlined genome, which may enable efficient adaptation to environmental changes, allowing P. caucaseum strain SO-1 to thrive in various ecological contexts. Overall, the traits of this bacterium highlight its potential role in microbial ecology, specifically in its interactions with the surrounding environment and other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyMagnetospirillaceae
GenusParamagnetospirillum
SpeciesParamagnetospirillum caucaseum
Strainstrain SO-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paramagnetospirillum caucaseum strain SO-1 contig00236, whole

Gene Summary

Adenine Count

824717 bp

Thymine Count

832253 bp

Guanine Count

1615813 bp

Cytosine Count

1597731 bp

Genome Length

4870514 bp

Protein-coding Genes

4494 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenase subunit iH261_11229Not AvailableNegative2355092 - 235558018555.4
nadh:ubiquinone oxidoreductase subunit 1H261_11234Not AvailableNegative2355594 - 235661937921.0
nadh dehydrogenase subunit gH261_11239Not AvailableNegative2356612 - 235868473898.7
nadh dehydrogenase i subunit fH261_11244Not AvailableNegative2358701 - 235998446747.3
nadh:ubiquinone oxidoreductase 24 kd subunitH261_11249Not AvailableNegative2359984 - 236059222054.3
nadh dehydrogenase subunit dH261_11254Not AvailableNegative2360589 - 236176744156.4
nadh dehydrogenase subunit cH261_11259Not AvailableNegative2361769 - 236236822684.0
nadh dehydrogenase subunit bH261_11264Not AvailableNegative2362390 - 236295620272.8
nadh:ubiquinone oxidoreductase subunit 3H261_11269Not AvailableNegative2362947 - 236331213822.2
Trna-aspNot AvailableNot AvailablePositive2363557 - 2363633Not Available

Displaying genes 2301 – 2310 of 4696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

102 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 102 metabolites

Health Effects

No health effects information available for this bacterium.