Halococcus thailandensis JCM 13552

Gram-negativeCocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus thailandensis JCM 13552 is a gram-negative, cocci-shaped archaeon. This organism is notable for possessing a single replicon, which is indicative of its streamlined genomic architecture. The strain is cataloged under the accession number AOMF00000000.1, providing a reference point for further genomic studies and comparisons within the Halococcus genus. The unique characteristics of Halococcus thailandensis suggest that it may have adapted to specific ecological niches, potentially in saline environments, given the habitat preferences of many Halococcus species. Such adaptations could influence its metabolic pathways and interactions with other microorganisms in its ecosystem. Understanding these traits can provide insights into the ecological roles of halophilic archaea and their contributions to biogeochemical cycles in extreme environments. In summary, Halococcus thailandensis JCM 13552 is a gram-negative cocci with a single replicon, making it an interesting subject for studies in microbial genetics and ecology. Its characteristics may help elucidate the evolutionary strategies employed by halophilic microorganisms to thrive in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus thailandensis
StrainJCM 13552

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus thailandensis JCM 13552 contig_198, whole genome

Gene Summary

Adenine Count

770031 bp

Thymine Count

776947 bp

Guanine Count

1252997 bp

Cytosine Count

1252045 bp

Genome Length

4052434 bp

Protein-coding Genes

4032 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dipeptides/oligopeptides abc transporter permeaseC451_20130Not AvailablePositive3928318 - 392933436335.2
putative dipeptides/oligopeptides abc transporter atp-binding proteinC451_20135Not AvailablePositive3929306 - 393037639610.0
putative dipeptides/oligopeptides abc transporter atp-binding proteinC451_20140Not AvailablePositive3930345 - 393143940821.2
transposaseC451_20145Not AvailableNegative3931654 - 393193510851.6
hypothetical proteinC451_20150Not AvailableNegative3931932 - 393219210028.7
hypothetical proteinC451_20160Not AvailableNegative3932703 - 39329127639.38
hypothetical proteinC451_20170Not AvailableNegative3933226 - 393428741132.5
orotate phosphoribosyltransferaseC451_20175Not AvailableNegative3934829 - 393535318782.1
amidaseC451_20180Not AvailablePositive3935893 - 393676531477.5
transposase (ish5)C451_20185Not AvailableNegative3936965 - 393808042226.5

Displaying genes 3971 – 3980 of 4086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.