Halococcus thailandensis JCM 13552

Gram-negativeCocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus thailandensis JCM 13552 is a gram-negative, cocci-shaped archaeon. This organism is notable for possessing a single replicon, which is indicative of its streamlined genomic architecture. The strain is cataloged under the accession number AOMF00000000.1, providing a reference point for further genomic studies and comparisons within the Halococcus genus. The unique characteristics of Halococcus thailandensis suggest that it may have adapted to specific ecological niches, potentially in saline environments, given the habitat preferences of many Halococcus species. Such adaptations could influence its metabolic pathways and interactions with other microorganisms in its ecosystem. Understanding these traits can provide insights into the ecological roles of halophilic archaea and their contributions to biogeochemical cycles in extreme environments. In summary, Halococcus thailandensis JCM 13552 is a gram-negative cocci with a single replicon, making it an interesting subject for studies in microbial genetics and ecology. Its characteristics may help elucidate the evolutionary strategies employed by halophilic microorganisms to thrive in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus thailandensis
StrainJCM 13552

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus thailandensis JCM 13552 contig_198, whole genome

Gene Summary

Adenine Count

770031 bp

Thymine Count

776947 bp

Guanine Count

1252997 bp

Cytosine Count

1252045 bp

Genome Length

4052434 bp

Protein-coding Genes

4032 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase)C451_13244Not AvailablePositive2560027 - 256097135727.8
carotene biosynthesis associated membrane proteinC451_13249Not AvailableNegative2560968 - 256181930315.4
prenyltransferaseC451_13254Not AvailableNegative2561809 - 256270532287.5
phytoene dehydrogenase 1 (phytoene desaturase)C451_13259Not AvailableNegative2562702 - 256421355715.4
lignostilbene-alpha,beta-dioxygenaseC451_13264Not AvailablePositive2564288 - 256573354074.3
dehydrogenase/ reductase 14C451_13269Not AvailablePositive2565777 - 256646623869.5
zinc transporterC451_13274Not AvailablePositive2566518 - 256736928645.3
hypothetical proteinC451_13279Not AvailablePositive2567449 - 256809624341.3
dna-directed rna-polymerase subunit mC451_13284Not AvailableNegative2568355 - 256867511641.2
ghmp kinase putative atp-binding proteinC451_13289Not AvailableNegative2568711 - 256968334385.1

Displaying genes 2601 – 2610 of 4086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.