Halococcus thailandensis JCM 13552

Gram-negativeCocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus thailandensis JCM 13552 is a gram-negative, cocci-shaped archaeon. This organism is notable for possessing a single replicon, which is indicative of its streamlined genomic architecture. The strain is cataloged under the accession number AOMF00000000.1, providing a reference point for further genomic studies and comparisons within the Halococcus genus. The unique characteristics of Halococcus thailandensis suggest that it may have adapted to specific ecological niches, potentially in saline environments, given the habitat preferences of many Halococcus species. Such adaptations could influence its metabolic pathways and interactions with other microorganisms in its ecosystem. Understanding these traits can provide insights into the ecological roles of halophilic archaea and their contributions to biogeochemical cycles in extreme environments. In summary, Halococcus thailandensis JCM 13552 is a gram-negative cocci with a single replicon, making it an interesting subject for studies in microbial genetics and ecology. Its characteristics may help elucidate the evolutionary strategies employed by halophilic microorganisms to thrive in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus thailandensis
StrainJCM 13552

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus thailandensis JCM 13552 contig_198, whole genome

Gene Summary

Adenine Count

770031 bp

Thymine Count

776947 bp

Guanine Count

1252997 bp

Cytosine Count

1252045 bp

Genome Length

4052434 bp

Protein-coding Genes

4032 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergenC451_06645Not AvailableNegative1325035 - 132550517054.3
hydrogenase expression/formation proteinC451_06650Not AvailableNegative1325576 - 132656834372.6
putative oxidoreductaseC451_06665Not AvailablePositive1328196 - 132907130616.9
udp-n-acetylglucosamine 2-epimeraseC451_06670Not AvailableNegative1329109 - 132965120885.2
udp-n-acetylglucosamine 2-epimeraseC451_06675Not AvailableNegative1329769 - 133037722219.0
hypothetical proteinC451_06680Not AvailableNegative1330657 - 13308576988.68
dna mismatch repair protein mutsC451_06685Not AvailableNegative1330925 - 133268262147.4
alcohol dehydrogenase zinc-binding domain proteinC451_06690Not AvailablePositive1332838 - 133385135138.1
polysaccharide deacetylaseC451_06695Not AvailableNegative1334047 - 133565457753.4
transposase is4 family proteinC451_06700Not AvailablePositive1336170 - 133734244224.4

Displaying genes 1281 – 1290 of 4086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.