Halococcus salifodinae DSM 8989

Gram-negativeCocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus salifodinae DSM 8989 is a gram-negative, cocci-shaped archaeon characterized by its single replicon. This organism is part of the Halococcus genus, which is known for thriving in high-salinity environments. The specific strain DSM 8989 has been assigned the accession number AOME00000000.1, which provides a reference for genomic studies and further research. As a member of the Halobacteriaceae family, Halococcus salifodinae exhibits adaptations that allow it to survive and flourish in extreme saline conditions, such as those found in salt flats and salt lakes. These adaptations are crucial for its cellular processes and overall survival in such harsh environments. The unique characteristics of Halococcus salifodinae contribute to our understanding of microbial life in extreme conditions. Studying this organism may provide insights into the biochemical pathways that enable life to persist in high-salinity habitats, as well as potential applications in biotechnology, such as bioremediation or the production of biomolecules. Thus, Halococcus salifodinae DSM 8989 serves as an important model organism for exploring the ecological roles and evolutionary strategies of halophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus salifodinae
StrainDSM 8989

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus salifodinae DSM 8989 contig_109, whole genome shotgun

Gene Summary

Adenine Count

771625 bp

Thymine Count

763467 bp

Guanine Count

1331147 bp

Cytosine Count

1333254 bp

Genome Length

4199784 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal-protein-alanine acetyltransferaseC450_16240Not AvailableNegative3286630 - 328710017129.3
hypothetical proteinC450_16245Not AvailablePositive3287305 - 328767013015.2
hypothetical proteinC450_16250Not AvailableNegative3287735 - 328812714432.4
hypothetical proteinC450_16255Not AvailableNegative3288154 - 328911932687.3
hypothetical proteinC450_16260Not AvailablePositive3289269 - 328956210934.6
glycine cleavage system protein tC450_16265Not AvailablePositive3289599 - 329069038885.4
transcriptional regulatorC450_16270Not AvailablePositive3290745 - 329155729770.7
gtp cyclohydrolaseC450_16275Not AvailableNegative3291575 - 329252234572.9
inorganic polyphosphate/atp-nad kinaseC450_16280Not AvailableNegative3292625 - 329344328402.6
uspa domain proteinC450_16285Not AvailableNegative3293923 - 329434515037.7

Displaying genes 3201 – 3210 of 4128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

63 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da

Displaying 1–10 of 63 metabolites

Health Effects

No health effects information available for this bacterium.