Halorubrum arcis JCM 13916

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum arcis JCM 13916 is a rod-shaped archaeon notable for its adaptation to extreme environments. This organism possesses flagella, which are essential for motility, allowing it to navigate through its saline habitat. It has a single replicon, indicating a streamlined genetic structure that is characteristic of many extremophiles. The genome of Halorubrum arcis is accessible under the accession AOJJ00000000.1, providing a resource for researchers interested in the genetic and metabolic pathways that enable its survival in harsh conditions. The presence of flagella not only facilitates movement but may also play a role in biofilm formation, which can be advantageous in high-salinity environments where nutrient availability may be limited. From an ecological perspective, Halorubrum arcis contributes to the microbial diversity in hypersaline ecosystems. Its ability to thrive in such extreme conditions illustrates the resilience of life forms and their potential roles in biogeochemical cycles within saline environments. Understanding the traits and capabilities of Halorubrum arcis can provide insights into microbial ecology and the evolutionary adaptations that allow life to flourish under extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum arcis JCM 13916


Gene Summary

Adenine Count

554478 bp

Thymine Count

550342 bp

Guanine Count

1137259 bp

Cytosine Count

1140369 bp

Genome Length

3382601 bp

Protein-coding Genes

3247 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpase aaaC462_13953Not AvailablePositive2876391 - 287864679945.8
transcriptional regulator, copg family proteinC462_13958Not AvailableNegative2878686 - 287920718942.8
transcriptional regulator, padr-like family proteinC462_13963Not AvailableNegative2879284 - 287958611122.7
had-superfamily hydrolase, subfamily ia, variant 1C462_13968Not AvailableNegative2879621 - 288035526450.3
hypothetical proteinC462_13973Not AvailableNegative2880434 - 288081714231.6
udp diphosphate synthaseC462_13978Not AvailablePositive2880883 - 288187837111.8
hypothetical proteinC462_13983Not AvailableNegative2881875 - 288297539819.1
hypothetical proteinC462_13988Not AvailableNegative2883071 - 288352916706.5
hypothetical proteinC462_13993Not AvailableNegative2883529 - 28837748981.75
translation initiation factor if-2C462_13998Not AvailablePositive2883974 - 288576765073.6

Displaying genes 2791 – 2800 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.