Halorubrum arcis JCM 13916

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum arcis JCM 13916 is a rod-shaped archaeon notable for its adaptation to extreme environments. This organism possesses flagella, which are essential for motility, allowing it to navigate through its saline habitat. It has a single replicon, indicating a streamlined genetic structure that is characteristic of many extremophiles. The genome of Halorubrum arcis is accessible under the accession AOJJ00000000.1, providing a resource for researchers interested in the genetic and metabolic pathways that enable its survival in harsh conditions. The presence of flagella not only facilitates movement but may also play a role in biofilm formation, which can be advantageous in high-salinity environments where nutrient availability may be limited. From an ecological perspective, Halorubrum arcis contributes to the microbial diversity in hypersaline ecosystems. Its ability to thrive in such extreme conditions illustrates the resilience of life forms and their potential roles in biogeochemical cycles within saline environments. Understanding the traits and capabilities of Halorubrum arcis can provide insights into microbial ecology and the evolutionary adaptations that allow life to flourish under extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum arcis JCM 13916


Gene Summary

Adenine Count

554478 bp

Thymine Count

550342 bp

Guanine Count

1137259 bp

Cytosine Count

1140369 bp

Genome Length

3382601 bp

Protein-coding Genes

3247 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit b''C462_09367Not AvailableNegative1942228 - 194379359198.7
dna-directed rna polymerase subunit hC462_09372Not AvailableNegative1943790 - 19440178471.98
Trna-aspNot AvailableNot AvailablePositive1944295 - 1944367Not Available
Trna-aspNot AvailableNot AvailablePositive1944398 - 1944470Not Available
histone deacetylase superfamily proteinC462_09377Not AvailableNegative1944811 - 194581535749.5
transcription factor cbf/nf-y/histone domain proteinC462_09382Not AvailableNegative1945816 - 194624715620.4
replication factor aC462_09387Not AvailableNegative1946345 - 194785053149.7
Trna-pseudoNot AvailableNot AvailablePositive1948099 - 1948171Not Available
trka-n domain proteinC462_09392Not AvailableNegative1948693 - 195052864279.8
hypothetical proteinC462_09397Not AvailableNegative1950539 - 195098514882.2

Displaying genes 1871 – 1880 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.