Halorubrum arcis JCM 13916

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum arcis JCM 13916 is a rod-shaped archaeon notable for its adaptation to extreme environments. This organism possesses flagella, which are essential for motility, allowing it to navigate through its saline habitat. It has a single replicon, indicating a streamlined genetic structure that is characteristic of many extremophiles. The genome of Halorubrum arcis is accessible under the accession AOJJ00000000.1, providing a resource for researchers interested in the genetic and metabolic pathways that enable its survival in harsh conditions. The presence of flagella not only facilitates movement but may also play a role in biofilm formation, which can be advantageous in high-salinity environments where nutrient availability may be limited. From an ecological perspective, Halorubrum arcis contributes to the microbial diversity in hypersaline ecosystems. Its ability to thrive in such extreme conditions illustrates the resilience of life forms and their potential roles in biogeochemical cycles within saline environments. Understanding the traits and capabilities of Halorubrum arcis can provide insights into microbial ecology and the evolutionary adaptations that allow life to flourish under extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum arcis JCM 13916


Gene Summary

Adenine Count

554478 bp

Thymine Count

550342 bp

Guanine Count

1137259 bp

Cytosine Count

1140369 bp

Genome Length

3382601 bp

Protein-coding Genes

3247 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
haloacid dehalogenaseC462_05795Not AvailablePositive1208255 - 120893824862.6
dihydrodipicolinate synthaseC462_05800Not AvailablePositive1209223 - 121022435558.2
dihydrodipicolinate reductaseC462_05805Not AvailablePositive1210221 - 121102727356.5
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseC462_05810Not AvailablePositive1211085 - 121192429915.8
diaminopimelate decarboxylaseC462_05815Not AvailablePositive1211921 - 121331849189.8
diaminopimelate epimeraseC462_05820Not AvailablePositive1213315 - 121426532770.7
succinyl-diaminopimelate desuccinylaseC462_05825Not AvailablePositive1214262 - 121552742759.2
hypothetical proteinC462_05830Not AvailableNegative1215553 - 121605018162.1
hypothetical proteinC462_05835Not AvailablePositive1216178 - 121728139859.3
tubulin/ftsz gtpaseC462_05840Not AvailablePositive1217445 - 121865040837.0

Displaying genes 1161 – 1170 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.