Halorubrum aidingense JCM 13560

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum aidingense JCM 13560 is a rod-shaped archaeon notable for its single replicon structure, which is characteristic of many prokaryotes. The presence of flagella indicates that this organism possesses the capability for motility, which is essential for navigating its environment and possibly for nutrient acquisition or evasion from predators. The organism is cataloged under the accession number AOJI00000000.1, which provides a reference for its genomic data. This genetic information can be crucial for understanding its metabolic pathways and ecological roles within its habitat. In terms of ecological insight, the motility provided by flagella may allow Halorubrum aidingense to thrive in extreme environments, typical for halophilic archaea, such as high-salinity waters. This ability to move toward favorable conditions or resources could enhance its survival and competitiveness in such extreme niches. Overall, Halorubrum aidingense exemplifies the adaptations of extremophilic microorganisms, showcasing how structural features like shape and motility mechanisms play a significant role in their ecological strategies.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum aidingense
StrainJCM 13560

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum aidingense JCM 13560 contig_37, whole genome shotgun

Gene Summary

Adenine Count

512499 bp

Thymine Count

507369 bp

Guanine Count

1046497 bp

Cytosine Count

1042096 bp

Genome Length

3108525 bp

Protein-coding Genes

2965 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent protease lonC461_05232Not AvailablePositive1088537 - 109078079987.0
signal transduction protein with cbs domainsC461_05237Not AvailablePositive1090886 - 109166828556.9
hypothetical proteinC461_05242Not AvailablePositive1091825 - 10920767904.22
pre-mrna processing ribonucleoprotein, binding domain proteinC461_05247Not AvailablePositive1092155 - 109306032471.1
fibrillarinC461_05252Not AvailablePositive1093053 - 109369123129.1
haloacid dehalogenaseC461_05257Not AvailableNegative1093808 - 109449125273.2
transcription initiation factor tfbC461_05262Not AvailableNegative1094565 - 109487311171.0
hhh-gpd family proteinC461_05267Not AvailablePositive1094951 - 109564925141.5
Trna-leuNot AvailableNot AvailablePositive1095714 - 1095801Not Available
xerc/d-like integraseC461_05272Not AvailablePositive1095820 - 109686941060.2

Displaying genes 1051 – 1060 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.