Halorubrum aidingense JCM 13560

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum aidingense JCM 13560 is a rod-shaped archaeon notable for its single replicon structure, which is characteristic of many prokaryotes. The presence of flagella indicates that this organism possesses the capability for motility, which is essential for navigating its environment and possibly for nutrient acquisition or evasion from predators. The organism is cataloged under the accession number AOJI00000000.1, which provides a reference for its genomic data. This genetic information can be crucial for understanding its metabolic pathways and ecological roles within its habitat. In terms of ecological insight, the motility provided by flagella may allow Halorubrum aidingense to thrive in extreme environments, typical for halophilic archaea, such as high-salinity waters. This ability to move toward favorable conditions or resources could enhance its survival and competitiveness in such extreme niches. Overall, Halorubrum aidingense exemplifies the adaptations of extremophilic microorganisms, showcasing how structural features like shape and motility mechanisms play a significant role in their ecological strategies.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum aidingense
StrainJCM 13560

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum aidingense JCM 13560 contig_37, whole genome shotgun

Gene Summary

Adenine Count

512499 bp

Thymine Count

507369 bp

Guanine Count

1046497 bp

Cytosine Count

1042096 bp

Genome Length

3108525 bp

Protein-coding Genes

2965 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
soul heme-binding proteinC461_09312Not AvailablePositive1906248 - 190688323745.1
hypothetical proteinC461_09317Not AvailableNegative1907169 - 190769318873.3
glycoside hydrolase 15-related proteinC461_09322Not AvailablePositive1909095 - 191109574527.0
glucose-1-phosphate thymidylyltransferaseC461_09327Not AvailablePositive1911467 - 191261239724.6
mut/nudix family proteinC461_09332Not AvailablePositive1912772 - 191317915017.4
oxidoreductaseC461_09337Not AvailablePositive1913580 - 191455135063.7
nad-dependent epimerase/dehydrataseC461_09342Not AvailablePositive1914548 - 191547133207.4
membrane protein involved in the export of o-antigen and teichoic acidC461_09347Not AvailablePositive1915523 - 191693850317.9
putative pqq-dependent glucose dehydrogenaseC461_09352Not AvailableNegative1916968 - 191833849054.1
glucosamine-1-phosphate n-acetyltransferaseC461_09357Not AvailablePositive1918483 - 191964340825.1

Displaying genes 1871 – 1880 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.