Halorubrum kocurii JCM 14978

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum kocurii JCM 14978 is a rod-shaped archaeon characterized by the presence of flagella, which facilitate motility. This organism has been classified with a single replicon, indicating a streamlined genomic structure typical of certain archaeal species. The accessibility of its genomic data is denoted by the accession number AOJH00000000.1. As a member of the Halorubrum genus, H. kocurii is likely adapted to extreme saline environments, a common habitat for many halophilic archaea. The presence of flagella suggests that H. kocurii has developed mechanisms for navigating its environment, which may be crucial for its survival and ecological interactions in high-salt conditions. The biological and ecological implications of H. kocurii's traits highlight its role in extreme ecosystems, where it may contribute to nutrient cycling and the overall biodiversity of microbial communities. Such organisms are essential for understanding life in extreme conditions and may have applications in biotechnology, particularly in processes that require high salt concentrations.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum kocurii
StrainJCM 14978

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum kocurii JCM 14978 contig_105, whole genome shotgun

Gene Summary

Adenine Count

594659 bp

Thymine Count

604797 bp

Guanine Count

1202764 bp

Cytosine Count

1217376 bp

Genome Length

3619738 bp

Protein-coding Genes

3422 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside-diphosphate-sugar epimerase (udp-glucose 4-epimerase)C468_00035Not AvailableNegative7645 - 855933882.8
transcriptional regulatorC468_00040Not AvailablePositive9198 - 1003731684.9
udp-glucose 4-epimeraseC468_00045Not AvailableNegative10119 - 1112036676.4
nad-dependent epimerase/dehydrataseC468_00050Not AvailableNegative11117 - 1208535737.4
udp-sulfoquinovose synthaseC468_00055Not AvailableNegative12141 - 1332243781.3
utp--glucose-1-phosphate uridylyltransferaseC468_00060Not AvailablePositive13677 - 1427322312.9
polysaccharide biosynthesis proteinC468_00065Not AvailablePositive14383 - 1584652753.1
hexosyltransferaseC468_00070Not AvailableNegative15843 - 1660427941.9
hypothetical proteinC468_00075Not AvailableNegative17169 - 1744410086.3
transposase (ish1)C468_00080Not AvailablePositive17495 - 1794417499.7

Displaying genes 21 – 30 of 3480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.