Halorubrum kocurii JCM 14978

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum kocurii JCM 14978 is a rod-shaped archaeon characterized by the presence of flagella, which facilitate motility. This organism has been classified with a single replicon, indicating a streamlined genomic structure typical of certain archaeal species. The accessibility of its genomic data is denoted by the accession number AOJH00000000.1. As a member of the Halorubrum genus, H. kocurii is likely adapted to extreme saline environments, a common habitat for many halophilic archaea. The presence of flagella suggests that H. kocurii has developed mechanisms for navigating its environment, which may be crucial for its survival and ecological interactions in high-salt conditions. The biological and ecological implications of H. kocurii's traits highlight its role in extreme ecosystems, where it may contribute to nutrient cycling and the overall biodiversity of microbial communities. Such organisms are essential for understanding life in extreme conditions and may have applications in biotechnology, particularly in processes that require high salt concentrations.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum kocurii
StrainJCM 14978

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum kocurii JCM 14978 contig_105, whole genome shotgun

Gene Summary

Adenine Count

594659 bp

Thymine Count

604797 bp

Guanine Count

1202764 bp

Cytosine Count

1217376 bp

Genome Length

3619738 bp

Protein-coding Genes

3422 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter membrane protein 1, cut1 familyC468_12597Not AvailableNegative2578733 - 257969835260.2
carbohydrate abc transporter substrate-binding protein, cut1 familyC468_12602Not AvailableNegative2579707 - 258092744540.6
carbohydrate abc transporter atp-binding protein, cut1 familyC468_12607Not AvailablePositive2581245 - 258237241296.1
alpha amylaseC468_12614Not AvailablePositive2582481 - 258453174996.5
glutathione s-transferaseC468_12619Not AvailableNegative2584572 - 258560338605.2
hypothetical proteinC468_12624Not AvailablePositive2585944 - 258674127903.4
fad dependent oxidoreductaseC468_12629Not AvailablePositive2586864 - 258883171609.1
hypothetical proteinC468_12644Not AvailableNegative2588695 - 25888505703.53
hypothetical proteinC468_12649Not AvailableNegative2588931 - 258940716149.2
radical sam proteinC468_12654Not AvailablePositive2589475 - 259135267263.2

Displaying genes 2501 – 2510 of 3480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.