Halorubrum kocurii JCM 14978

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum kocurii JCM 14978 is a rod-shaped archaeon characterized by the presence of flagella, which facilitate motility. This organism has been classified with a single replicon, indicating a streamlined genomic structure typical of certain archaeal species. The accessibility of its genomic data is denoted by the accession number AOJH00000000.1. As a member of the Halorubrum genus, H. kocurii is likely adapted to extreme saline environments, a common habitat for many halophilic archaea. The presence of flagella suggests that H. kocurii has developed mechanisms for navigating its environment, which may be crucial for its survival and ecological interactions in high-salt conditions. The biological and ecological implications of H. kocurii's traits highlight its role in extreme ecosystems, where it may contribute to nutrient cycling and the overall biodiversity of microbial communities. Such organisms are essential for understanding life in extreme conditions and may have applications in biotechnology, particularly in processes that require high salt concentrations.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum kocurii
StrainJCM 14978

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum kocurii JCM 14978 contig_105, whole genome shotgun

Gene Summary

Adenine Count

594659 bp

Thymine Count

604797 bp

Guanine Count

1202764 bp

Cytosine Count

1217376 bp

Genome Length

3619738 bp

Protein-coding Genes

3422 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide sugar dehydrogenaseC468_06223Not AvailableNegative1312623 - 131391245522.5
udp-n-acetylglucosamine 2-epimeraseC468_06228Not AvailableNegative1313909 - 131500939914.6
family 2 glycosyl transferaseC468_06233Not AvailableNegative1315006 - 131611840492.4
dna binding domain proteinC468_06238Not AvailableNegative1316357 - 131664111049.0
hypothetical proteinC468_06243Not AvailablePositive1316871 - 131740119671.2
hypothetical proteinC468_06248Not AvailableNegative1317440 - 131801820783.4
glucose fructose oxidoreductaseC468_06253Not AvailablePositive1318375 - 131945439351.8
hypothetical proteinC468_06258Not AvailablePositive1319588 - 132002214662.6
membrane-bound metal-dependent hydrolaseC468_06263Not AvailablePositive1320123 - 132071321334.0
sugar phosphate isomerase/epimeraseC468_06268Not AvailableNegative1320783 - 132167932558.2

Displaying genes 1241 – 1250 of 3480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.