Halorubrum kocurii JCM 14978

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum kocurii JCM 14978 is a rod-shaped archaeon characterized by the presence of flagella, which facilitate motility. This organism has been classified with a single replicon, indicating a streamlined genomic structure typical of certain archaeal species. The accessibility of its genomic data is denoted by the accession number AOJH00000000.1. As a member of the Halorubrum genus, H. kocurii is likely adapted to extreme saline environments, a common habitat for many halophilic archaea. The presence of flagella suggests that H. kocurii has developed mechanisms for navigating its environment, which may be crucial for its survival and ecological interactions in high-salt conditions. The biological and ecological implications of H. kocurii's traits highlight its role in extreme ecosystems, where it may contribute to nutrient cycling and the overall biodiversity of microbial communities. Such organisms are essential for understanding life in extreme conditions and may have applications in biotechnology, particularly in processes that require high salt concentrations.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum kocurii
StrainJCM 14978

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum kocurii JCM 14978 contig_105, whole genome shotgun

Gene Summary

Adenine Count

594659 bp

Thymine Count

604797 bp

Guanine Count

1202764 bp

Cytosine Count

1217376 bp

Genome Length

3619738 bp

Protein-coding Genes

3422 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydrataseC468_08109Not AvailablePositive1666358 - 166737737451.2
aldo/keto reductaseC468_08114Not AvailableNegative1667885 - 166885936561.4
nad-dependent epimerase/dehydrataseC468_08119Not AvailablePositive1668954 - 166985031850.6
hypothetical proteinC468_08124Not AvailableNegative1669857 - 16700878272.52
oligopeptide/dipeptide abc transporter, atp-binding proteinC468_08129Not AvailableNegative1670145 - 167123339886.8
oligopeptide/dipeptide abc transporter atpaseC468_08134Not AvailableNegative1671230 - 167231239139.0
abc-type dipeptide/oligopeptide/nickel transport system, permease componentC468_08139Not AvailableNegative1672313 - 167332336569.6
abc-type dipeptide/oligopeptide/nickel transport system, permease componentC468_08144Not AvailableNegative1673313 - 167431436404.6
extracellular solute-binding protein, family 5C468_08149Not AvailableNegative1674363 - 167612064293.2
beta-glucosidaseC468_08154Not AvailablePositive1676384 - 167861279601.9

Displaying genes 1621 – 1630 of 3480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.