Halorubrum litoreum JCM 13561

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum litoreum JCM 13561 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in its saline environment. This organism has a single replicon, indicating a streamlined genetic structure that is typical among certain archaeal species. The accession number for Halorubrum litoreum is AOJF00000000.1, which provides a reference for genomic information associated with this strain. As a member of the Halorubrum genus, H. litoreum is adapted to thrive in high-salt conditions, which is a common trait among halophilic microorganisms. Its flagella not only aid in movement but may also play a role in its ability to colonize and compete in extreme habitats where saline concentrations are high. The ecological significance of Halorubrum litoreum lies in its potential contributions to biogeochemical cycles in saline ecosystems. Its ability to thrive in extreme environments allows it to participate in nutrient cycling, particularly in salt flats and hypersaline lakes, where it may influence the availability of organic and inorganic compounds. Understanding the traits of H. litoreum can provide insights into the adaptability of microbial life in harsh conditions, as well as its role in maintaining the ecological balance within its native habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum litoreum JCM 13561 contig_63, whole genome shotgun

Gene Summary

Adenine Count

491247 bp

Thymine Count

484441 bp

Guanine Count

1081066 bp

Cytosine Count

1080888 bp

Genome Length

3137757 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome oxidase assemblyC470_13652Not AvailableNegative2791901 - 279274028279.7
mate efflux family proteinC470_13657Not AvailablePositive2793105 - 279449447922.1
transposase, is605 orfb family proteinC470_13668Not AvailablePositive2794635 - 279588547148.4
helicaseC470_13673Not AvailableNegative2795944 - 279639916858.8
Trna-pseudoNot AvailableNot AvailablePositive2796560 - 2796632Not Available
beta-lactamaseC470_13678Not AvailableNegative2796878 - 279761226407.5
hypothetical proteinC470_13683Not AvailablePositive2797795 - 27980017295.47
hypothetical proteinC470_13688Not AvailablePositive2797998 - 279907437620.7
na+/h+ antiporter nhacC470_13693Not AvailableNegative2799341 - 280102659049.8
aspartate-semialdehyde dehydrogenaseC470_13698Not AvailablePositive2801244 - 280229036702.7

Displaying genes 2731 – 2740 of 3062 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.