Halorubrum litoreum JCM 13561

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum litoreum JCM 13561 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in its saline environment. This organism has a single replicon, indicating a streamlined genetic structure that is typical among certain archaeal species. The accession number for Halorubrum litoreum is AOJF00000000.1, which provides a reference for genomic information associated with this strain. As a member of the Halorubrum genus, H. litoreum is adapted to thrive in high-salt conditions, which is a common trait among halophilic microorganisms. Its flagella not only aid in movement but may also play a role in its ability to colonize and compete in extreme habitats where saline concentrations are high. The ecological significance of Halorubrum litoreum lies in its potential contributions to biogeochemical cycles in saline ecosystems. Its ability to thrive in extreme environments allows it to participate in nutrient cycling, particularly in salt flats and hypersaline lakes, where it may influence the availability of organic and inorganic compounds. Understanding the traits of H. litoreum can provide insights into the adaptability of microbial life in harsh conditions, as well as its role in maintaining the ecological balance within its native habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum litoreum JCM 13561 contig_63, whole genome shotgun

Gene Summary

Adenine Count

491247 bp

Thymine Count

484441 bp

Guanine Count

1081066 bp

Cytosine Count

1080888 bp

Genome Length

3137757 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-ubiquinone oxidoreductase chain 49kdaC470_05151Not AvailablePositive1063028 - 106469263267.5
respiratory-chain nadh dehydrogenase subunit 1C470_05156Not AvailablePositive1064692 - 106576537732.6
nadh-quinone oxidoreductase, chain iC470_05161Not AvailablePositive1065767 - 106622817633.7
nadh dehydrogenase subunit jC470_05166Not AvailablePositive1066278 - 10665449277.67
nadh dehydrogenase-like complex, subunit j2C470_05171Not AvailablePositive1066541 - 106690012077.2
nadh-ubiquinone oxidoreductase chain 4lC470_05176Not AvailablePositive1066897 - 106721711491.4
proton-translocating nadh-quinone oxidoreductase, chain lC470_05181Not AvailablePositive1067219 - 106926772073.3
proton-translocating nadh-quinone oxidoreductase, chain mC470_05186Not AvailablePositive1069282 - 107079653664.0
proton-translocating nadh-quinone oxidoreductase, chain nC470_05191Not AvailablePositive1070810 - 107229150937.3
hypothetical proteinC470_05196Not AvailablePositive1072438 - 107273411229.9

Displaying genes 1031 – 1040 of 3062 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.