Natrinema limicola JCM 13563

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema limicola JCM 13563 is a halophilic archaeon known for its adaptation to high-salinity environments. This organism has a single replicon, indicating a streamlined genomic structure that allows for efficient replication and maintenance under extreme conditions. The strain is cataloged under the accession number AOIT00000000.1, which provides a reference for its genomic data. As a member of the Archaea domain, Natrinema limicola exhibits unique biochemical properties that distinguish it from bacteria and eukaryotes. Its halophilic nature suggests that it thrives in saline habitats, potentially contributing to the microbial diversity and ecological balance of such environments. The ecological role of Natrinema limicola may involve nutrient cycling and the degradation of organic materials in hypersaline ecosystems. By participating in these processes, this archaeon can help maintain the health and stability of its habitat, demonstrating the importance of halophiles in extreme environments. This strain's adaptation mechanisms may also provide insights into microbial life in similar extreme conditions, highlighting the resilience and versatility of life on Earth.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema limicola
StrainJCM 13563

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema limicola JCM 13563 contig_94, whole genome shotgun

Gene Summary

Adenine Count

670322 bp

Thymine Count

675173 bp

Guanine Count

1086253 bp

Cytosine Count

1090120 bp

Genome Length

3522035 bp

Protein-coding Genes

3506 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fructose-bisphosphate aldolaseC476_01102Not AvailableNegative227282 - 22807627465.1
tryptophan synthase subunit alphaC476_01107Not AvailableNegative228101 - 22903332817.1
tryptophan synthase subunit betaC476_01112Not AvailableNegative229030 - 23034347511.5
indole-3-glycerol phosphate synthaseC476_01117Not AvailableNegative230369 - 23116928163.6
copg domain protein dna-binding domain proteinC476_01122Not AvailableNegative231361 - 23177415990.1
hypothetical proteinC476_01127Not AvailableNegative231859 - 23250024004.0
replication factor aC476_01132Not AvailableNegative232502 - 23343134485.7
dihydrodipicolinate synthaseC476_01137Not AvailableNegative233588 - 23447831149.4
hypothetical proteinC476_01142Not AvailablePositive234593 - 23490412019.9
mannose-1-phosphate guanylyltransferase (gdp)C476_01147Not AvailablePositive234992 - 2351806713.9

Displaying genes 251 – 260 of 3571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.