Natrinema limicola JCM 13563

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema limicola JCM 13563 is a halophilic archaeon known for its adaptation to high-salinity environments. This organism has a single replicon, indicating a streamlined genomic structure that allows for efficient replication and maintenance under extreme conditions. The strain is cataloged under the accession number AOIT00000000.1, which provides a reference for its genomic data. As a member of the Archaea domain, Natrinema limicola exhibits unique biochemical properties that distinguish it from bacteria and eukaryotes. Its halophilic nature suggests that it thrives in saline habitats, potentially contributing to the microbial diversity and ecological balance of such environments. The ecological role of Natrinema limicola may involve nutrient cycling and the degradation of organic materials in hypersaline ecosystems. By participating in these processes, this archaeon can help maintain the health and stability of its habitat, demonstrating the importance of halophiles in extreme environments. This strain's adaptation mechanisms may also provide insights into microbial life in similar extreme conditions, highlighting the resilience and versatility of life on Earth.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema limicola
StrainJCM 13563

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema limicola JCM 13563 contig_94, whole genome shotgun

Gene Summary

Adenine Count

670322 bp

Thymine Count

675173 bp

Guanine Count

1086253 bp

Cytosine Count

1090120 bp

Genome Length

3522035 bp

Protein-coding Genes

3506 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalt abc transporter atp-binding proteinC476_05148Not AvailablePositive1004746 - 100547126399.6
copg domain protein dna-binding domain proteinC476_05153Not AvailableNegative1005765 - 100635221883.4
phosphodiesterase, mj0936 family proteinC476_05158Not AvailableNegative1006388 - 100688817513.3
initiation factor 2b related proteinC476_05163Not AvailablePositive1006950 - 100834149223.6
hypothetical proteinC476_05168Not AvailableNegative1008573 - 10087616620.31
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding proteinC476_05173Not AvailablePositive1009005 - 100993433802.4
gtp-binding proteinC476_05178Not AvailableNegative1010290 - 101091323732.9
hypothetical proteinC476_05183Not AvailableNegative1011026 - 101149915705.6
hypothetical proteinC476_05188Not AvailablePositive1011610 - 101290246005.4
small gtp-binding proteinC476_05193Not AvailableNegative1012954 - 101385333131.5

Displaying genes 1051 – 1060 of 3571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.