Natrinema altunense JCM 12890

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema altunense JCM 12890 is a halophilic archaeon characterized by its unique genomic and physiological traits. It possesses a single replicon, which is indicative of its streamlined genetic organization. This organism is notable for its ability to thrive in high-salinity environments, a defining characteristic of the Natrinema genus. The genomic information related to Natrinema altunense is cataloged under the accession number AOIK00000000.1. This data provides insights into the organism's genetic makeup, which contributes to its adaptability in extreme conditions. Such adaptations may include specific metabolic pathways that enable survival in hypersaline habitats, although further details on these pathways are not specified. Ecologically, Natrinema altunense plays a role in the microbial communities of saline environments, where it can contribute to biogeochemical cycles. Its presence in such niches underscores the importance of halophilic microorganisms in maintaining ecosystem balance and nutrient cycling in extreme habitats. The study of Natrinema altunense can enhance our understanding of microbial life in saline conditions and may have potential applications in biotechnology due to its unique adaptations.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema altunense
StrainJCM 12890

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema altunense JCM 12890 contig_52, whole genome shotgun

Gene Summary

Adenine Count

665885 bp

Thymine Count

672335 bp

Guanine Count

1220790 bp

Cytosine Count

1215857 bp

Genome Length

3774970 bp

Protein-coding Genes

3727 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mscs mechanosensitive ion channelC485_10639Not AvailableNegative2083181 - 208434142254.0
16s ribosomal rna methyltransferase ksga/dim1 family proteinC485_10644Not AvailableNegative2084448 - 208528730552.8
hypothetical proteinC485_10649Not AvailableNegative2085456 - 208605222633.1
dna-directed rna polymerase subunit fC485_10654Not AvailableNegative2086172 - 208652813677.0
50s ribosomal protein l21eC485_10659Not AvailableNegative2086536 - 208684411403.5
zn-dependent hydrolase of the beta-lactamase fold-like proteinC485_10664Not AvailableNegative2086994 - 208835551938.0
cys/met metabolism pyridoxal-phosphate-dependent proteinC485_10669Not AvailablePositive2088519 - 208968542315.8
multi-sensor signal transduction histidine kinaseC485_10674Not AvailablePositive2089793 - 209153562615.1
atp dependent dna ligaseC485_10679Not AvailableNegative2091583 - 209272242201.7
hypothetical proteinC485_10684Not AvailablePositive2092857 - 209354326034.5

Displaying genes 2131 – 2140 of 3785 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.