Natronorubrum bangense JCM 10635

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum bangense JCM 10635 is a halophilic archaeon characterized by its unique adaptation to high-salinity environments. This microorganism possesses three replicons, which may contribute to its resilience and adaptability in extreme conditions. The genomic information for Natronorubrum bangense is available under several accessions, including AOHY00000000.1, NZ_CP031306.1, and NZ_CP031308.1. The presence of multiple replicons is a notable feature, as it can facilitate various metabolic processes and enhance genetic diversity, potentially providing a survival advantage in fluctuating saline environments. This trait suggests that Natronorubrum bangense may utilize a range of metabolic pathways, allowing it to thrive in hypersaline habitats where few other organisms can survive. Ecologically, Natronorubrum bangense plays a significant role in the microbial communities of saline environments, such as salt lakes and salt flats. Its ability to adapt to high salinity not only highlights its ecological niche but also emphasizes the importance of halophilic archaea in biogeochemical cycles within these extreme habitats. Understanding the genetic and metabolic traits of Natronorubrum bangense can provide insights into the evolutionary mechanisms that allow life to flourish in extreme conditions, thereby contributing to our knowledge of microbial diversity and adaptation.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum bangense
StrainJCM 10635

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum bangense JCM 10635 contig_62, whole genome shotgun

Gene Summary

Adenine Count

814148 bp

Thymine Count

814217 bp

Guanine Count

1241852 bp

Cytosine Count

1240898 bp

Genome Length

4111275 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter periplasmic phosphate-binding proteinC494_00207Not AvailablePositive36656 - 3769038147.3
phosphate abc transporter permeaseC494_00212Not AvailablePositive37687 - 3860732814.3
phosphate abc transporter permeaseC494_00217Not AvailablePositive38604 - 3950632073.6
atp-binding region atpase domain-containing proteinC494_00222Not AvailablePositive39624 - 4135462012.8
phosphate abc transporter atp-binding proteinC494_00227Not AvailablePositive41555 - 4241831213.5
phosphate uptake regulator phouC494_00232Not AvailablePositive42521 - 4319225607.3
hypothetical proteinC494_00237Not AvailableNegative43268 - 4412230322.2
hypothetical proteinC494_00242Not AvailablePositive44248 - 444457406.54
Trna-serNot AvailableNot AvailablePositive44649 - 44733Not Available
hypothetical proteinC494_00247Not AvailablePositive44834 - 450317156.93

Displaying genes 81 – 90 of 4958 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

11 records
Metabolite IDMetabolite nameStructureCAS number
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003721N-(6-aminohexanoyl)-6-aminohexanoateC12H24N2O3Chemical structure of N-(6-aminohexanoyl)-6-aminohexanoateNot available
Average244.335Da
Monoisotopic244.1786926Da
BASm00045794-O-beta-D-mannopyranosyl-D-glucopyranoseC12H22O11Chemical structure of 4-O-beta-D-mannopyranosyl-D-glucopyranoseNot available
Average342.297Da
Monoisotopic342.116211528Da

Displaying 1–10 of 11 metabolites

Health Effects

No health effects information available for this bacterium.