Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis decaplanina |
| Strain | DSM 44594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1339029 bp
Thymine Count
1340308 bp
Guanine Count
2914828 bp
Cytosine Count
2939083 bp
Genome Length
8533276 bp
Protein-coding Genes
7716 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dipeptidase | H074_00107 | Not Available | Negative | 28747 - 29877 | 40518.1 |
| short-chain dehydrogenase/reductase sdr | H074_00112 | Not Available | Positive | 30010 - 30825 | 28753.2 |
| 2-epi-5-epi-valiolone synthase | H074_00117 | Not Available | Negative | 30844 - 32118 | 46422.9 |
| hypothetical protein | H074_00122 | Not Available | Negative | 32350 - 33279 | 33516.0 |
| histidine ammonia-lyase | H074_00127 | Not Available | Positive | 33615 - 35063 | 50478.2 |
| l-tyosine 3-hydroxylase | H074_00132 | Not Available | Positive | 35060 - 35878 | 29936.9 |
| caffeoyl o-methyltransferase | H074_00137 | Not Available | Positive | 35875 - 36549 | 24146.8 |
| amp-dependent synthetase and ligase | H074_00142 | Not Available | Positive | 36559 - 38796 | 77387.3 |
| transcriptional regulator | H074_00147 | Not Available | Negative | 38840 - 40093 | 45954.8 |
| hypothetical protein | H074_00152 | Not Available | Positive | 40665 - 42077 | 49240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
