Amycolatopsis decaplanina DSM 44594

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis decaplanina DSM 44594 is a Gram-positive, aerobic bacterium characterized by its non-motile nature and the presence of flagella. This species thrives optimally at a temperature of 29°C, fitting within the mesophilic temperature range which typically spans from approximately 20°C to 45°C. The organism is notable for its genomic characteristics, possessing a single replicon, which is a defining feature of its genetic structure. For research and reference purposes, the accession number for its genome is AOHO00000000.1, providing a resource for further exploration of its genetic and functional attributes. From a biological and ecological perspective, the aerobic requirement of Amycolatopsis decaplanina indicates its potential role in environments where oxygen is readily available, possibly contributing to the degradation of organic materials or participating in nutrient cycling. The combination of its mesophilic temperature preference and non-motility suggests that this bacterium may inhabit diverse terrestrial environments, where it can effectively exploit resources without the need for movement. The presence of flagella, despite being non-motile, may imply other functions, such as sensing environmental conditions or aiding in adherence to surfaces. Overall, Amycolatopsis decaplanina DSM 44594 represents a distinct member of its genus, with traits conducive to specific ecological niches.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis decaplanina
StrainDSM 44594

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis decaplanina DSM 44594 Contig0085, whole genome

Gene Summary

Adenine Count

1339029 bp

Thymine Count

1340308 bp

Guanine Count

2914828 bp

Cytosine Count

2939083 bp

Genome Length

8533276 bp

Protein-coding Genes

7716 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinH074_00055Not AvailablePositive10982 - 111887606.39
hypothetical proteinH074_00060Not AvailablePositive11279 - 1180218529.9
hypothetical proteinH074_00065Not AvailablePositive11803 - 120036990.19
hypothetical proteinH074_00072Not AvailablePositive13182 - 17546157973.0
transposaseH074_00077Not AvailableNegative17943 - 1894737591.6
peptidase s8/s53 subtilisin kexin sedolisinH074_00082Not AvailablePositive19938 - 2094234026.6
putative ftsk/spoiiie family proteinH074_00087Not AvailableNegative21082 - 25068145968.0
hypothetical proteinH074_00092Not AvailablePositive25325 - 2708859297.9
hypothetical proteinH074_00097Not AvailablePositive27567 - 2795914561.3
hpch/hpai aldolaseH074_00102Not AvailableNegative27992 - 2875026264.2

Displaying genes 11 – 20 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.