Pectobacterium peruviense strain UGC32 C27_001

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium peruviense strain UGC32 C27_001 is a Gram-negative bacterium known for its pathogenicity in various plants. This strain possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in diverse environments. The presence of flagella suggests that this bacterium is motile, which could facilitate its movement towards favorable conditions or hosts. The strain is cataloged under the accession number AODU00000000.1, which provides a reference point for genomic studies and comparison with other related strains. This identification is crucial for researchers focusing on plant-pathogen interactions, as it allows for the exploration of the strain's genetic features and pathogenic mechanisms. In terms of ecological implications, the motility conferred by flagella may enhance Pectobacterium peruviense's ability to colonize plant tissues, thereby increasing its potential as a plant pathogen. Understanding its genetic makeup and motility can provide insights into its lifecycle and interactions within agricultural ecosystems. As such, studying this strain is vital for developing management strategies against diseases caused by Pectobacterium species, which can have significant impacts on crop yield and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium peruviense
Strainstrain UGC32 C27_001

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium peruviense strain UGC32 C27_001, whole genome

Gene Summary

Adenine Count

1171771 bp

Thymine Count

1174723 bp

Guanine Count

1228535 bp

Cytosine Count

1222707 bp

Genome Length

4797741 bp

Protein-coding Genes

4045 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinG033_14580Not AvailableNegative3306309 - 330693524632.2
lysr family transcriptional regulatorG033_14590Not AvailableNegative3307849 - 330874233179.1
germinG033_14595Not AvailablePositive3309048 - 330944314300.6
molecular chaperone tordG033_14600Not AvailableNegative3309528 - 330985112204.0
iron abc transporter substrate-binding proteinG033_14605Not AvailablePositive3310350 - 331136636504.2
iron abc transporter permeaseG033_14610Not AvailablePositive3311507 - 331308456709.1
amino acid abc transporter substrate-binding proteinG033_14615Not AvailablePositive3313087 - 331412737234.8
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseG033_14620Not AvailableNegative3314158 - 331455014337.3
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseG033_14625Not AvailableNegative3314550 - 331489112779.3
4-amino-4-deoxy-l-arabinose transferaseG033_14630Not AvailableNegative3314888 - 331655862623.6

Displaying genes 2881 – 2890 of 4175 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.