Streptococcus ratti FA-1 = DSM 20564

microaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus ratti FA-1, also known as DSM 20564, is a microaerophilic bacterium, indicating that it requires reduced levels of oxygen for optimal growth. This characteristic is significant as it suggests specific ecological niches where S. ratti FA-1 may thrive, potentially within environments that have limited oxygen availability. The organism possesses true flagella, which may imply a degree of motility. This motility could facilitate its colonization and survival in various habitats, enabling the bacterium to navigate towards favorable conditions or escape from adverse environments. Genetically, Streptococcus ratti FA-1 has a single replicon, which is indicative of its genomic organization. This trait may influence its replication and the overall regulation of its cellular processes. The genetic information for S. ratti FA-1 can be accessed through the accession number AOCD00000000.1, which provides a point of reference for researchers interested in further studying its genetic makeup and potential applications. In summary, the microaerophilic nature, presence of true flagella, and single replicon of Streptococcus ratti FA-1 highlight its specialized adaptations for survival in specific environments. These characteristics suggest that this bacterium may play a role in ecological systems where oxygen concentrations are low, potentially influencing microbial community dynamics and interactions in such habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus ratti
StrainFA-1 = DSM 20564

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptococcus ratti FA-1 = DSM 20564
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus ratti FA-1 = DSM 20564 Contig275, whole genome

Gene Summary

Adenine Count

603137 bp

Thymine Count

602935 bp

Guanine Count

422110 bp

Cytosine Count

409002 bp

Genome Length

2037184 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transmembrane proteinD822_08210Not AvailableNegative1692417 - 1695242107075.0
udp-glucose 4-epimeraseD822_08215Not AvailableNegative1695388 - 169641037151.3
transmembrane proteinD822_08220Not AvailableNegative1696438 - 1699362110779.0
stress response proteinD822_08225Not AvailableNegative1699359 - 170032136638.6
collagen-binding proteinD822_08230Not AvailableNegative1700576 - 170094712462.1
hypothetical proteinD822_08235Not AvailablePositive1701119 - 170178424712.3
hypothetical proteinD822_08240Not AvailablePositive1702136 - 170297831561.1
30s ribosomal protein s18D822_08245Not AvailableNegative1703388 - 17036279204.3
single-stranded dna-binding proteinD822_08250Not AvailableNegative1703686 - 170417718219.9
30s ribosomal protein s6D822_08255Not AvailableNegative1704195 - 170448511196.3

Displaying genes 1641 – 1650 of 1984 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0017287CarbamoylphosphateCH4NO5PChemical structure of Carbamoylphosphate590-55-6
Average141.0199Da
Monoisotopic140.982708755Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.