Grimontia indica strain AK16

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia indica strain AK16 is a Gram-negative bacterium characterized by a single replicon. This strain is cataloged under the accession number ANFM00000000.2. The Gram-negative classification indicates that Grimontia indica possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which are important for its structural integrity and can influence its interactions with the environment and other organisms. The presence of only one replicon suggests a streamlined genomic organization, which may affect its replication and genetic stability. Understanding the traits of Grimontia indica strain AK16 contributes to our knowledge of microbial diversity and ecology. The unique characteristics of this strain could have implications for its ecological role, particularly in environments where it resides. As a Gram-negative bacterium, it may play a significant role in nutrient cycling or as a participant in microbial communities, potentially influencing the dynamics of those ecosystems. Further research into this strain could provide insights into its ecological interactions and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia indica
Strainstrain AK16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia indica strain AK16 contig109, whole genome shotgun

Gene Summary

Adenine Count

1423467 bp

Thymine Count

1426370 bp

Guanine Count

1363418 bp

Cytosine Count

1342335 bp

Genome Length

5555590 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain proteinD515_03175Not AvailableNegative4251158 - 425263055419.3
hypothetical proteinD515_03176Not AvailableNegative4252907 - 425397738896.0
hypothetical proteinD515_03177Not AvailableNegative4254050 - 425509937546.9
hypothetical proteinD515_03178Not AvailablePositive4255546 - 42556684428.35
gbca glycine betaine demethylase subunit aD515_03179Not AvailablePositive4255661 - 425691447997.8
flavodoxin reductases (ferredoxin-nadph reductases) family 1D515_03180Not AvailablePositive4257047 - 425816241546.4
hypothetical proteinD515_03181Not AvailablePositive4258415 - 42585554899.71
formate efflux transporterD515_03182Not AvailableNegative4258713 - 425955530485.1
oligopeptide transport system permease protein oppbD515_03183Not AvailablePositive4259927 - 426095238254.0
dipeptide transport system permease protein dppcD515_03184Not AvailablePositive4260949 - 426199839521.0

Displaying genes 3921 – 3930 of 5034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.