Grimontia indica strain AK16

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia indica strain AK16 is a Gram-negative bacterium characterized by a single replicon. This strain is cataloged under the accession number ANFM00000000.2. The Gram-negative classification indicates that Grimontia indica possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which are important for its structural integrity and can influence its interactions with the environment and other organisms. The presence of only one replicon suggests a streamlined genomic organization, which may affect its replication and genetic stability. Understanding the traits of Grimontia indica strain AK16 contributes to our knowledge of microbial diversity and ecology. The unique characteristics of this strain could have implications for its ecological role, particularly in environments where it resides. As a Gram-negative bacterium, it may play a significant role in nutrient cycling or as a participant in microbial communities, potentially influencing the dynamics of those ecosystems. Further research into this strain could provide insights into its ecological interactions and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia indica
Strainstrain AK16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia indica strain AK16 contig109, whole genome shotgun

Gene Summary

Adenine Count

1423467 bp

Thymine Count

1426370 bp

Guanine Count

1363418 bp

Cytosine Count

1342335 bp

Genome Length

5555590 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoglutarate-dependent taurine dioxygenaseD515_02941Not AvailablePositive4002363 - 400321131742.6
oligopeptide abc transporter, periplasmic oligopeptide-binding protein oppaD515_02942Not AvailablePositive4003827 - 400548261757.5
oligopeptide transport atp-binding protein oppdD515_02943Not AvailablePositive4005491 - 400643834097.5
oligopeptide transport atp-binding protein oppfD515_02944Not AvailablePositive4006449 - 400746536876.6
oligopeptide transport system permease protein oppbD515_02945Not AvailablePositive4007462 - 400842434783.5
dipeptide transport system permease protein dppcD515_02946Not AvailablePositive4008427 - 400936833585.4
nnrs protein involved in response to noD515_02947Not AvailablePositive4009516 - 401070643826.3
glutamine amidotransferases class-iiD515_02948Not AvailablePositive4010838 - 401156927822.8
hypothetical proteinD515_02949Not AvailableNegative4011600 - 401235828203.9
hypothetical proteinD515_02950Not AvailablePositive4012681 - 401331624182.5

Displaying genes 3681 – 3690 of 5034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.