Grimontia indica strain AK16

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia indica strain AK16 is a Gram-negative bacterium characterized by a single replicon. This strain is cataloged under the accession number ANFM00000000.2. The Gram-negative classification indicates that Grimontia indica possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which are important for its structural integrity and can influence its interactions with the environment and other organisms. The presence of only one replicon suggests a streamlined genomic organization, which may affect its replication and genetic stability. Understanding the traits of Grimontia indica strain AK16 contributes to our knowledge of microbial diversity and ecology. The unique characteristics of this strain could have implications for its ecological role, particularly in environments where it resides. As a Gram-negative bacterium, it may play a significant role in nutrient cycling or as a participant in microbial communities, potentially influencing the dynamics of those ecosystems. Further research into this strain could provide insights into its ecological interactions and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia indica
Strainstrain AK16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia indica strain AK16 contig109, whole genome shotgun

Gene Summary

Adenine Count

1423467 bp

Thymine Count

1426370 bp

Guanine Count

1363418 bp

Cytosine Count

1342335 bp

Genome Length

5555590 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylglyoxal synthaseD515_01823Not AvailablePositive2801260 - 280173317581.3
putative paraquat-inducible protein bD515_01824Not AvailablePositive2801744 - 280294043646.7
hypothetical proteinD515_01825Not AvailableNegative2803004 - 280329710867.0
hypothetical proteinD515_01826Not AvailablePositive2803551 - 28037999452.68
putative integral membrane proteinD515_01827Not AvailablePositive2803931 - 280530150306.9
carbon starvation protein aD515_01828Not AvailablePositive2805454 - 280693853256.1
autolysin sensor kinaseD515_01829Not AvailablePositive2807036 - 280873361831.5
tesponse regulator of the lytr/algr familyD515_01830Not AvailablePositive2808727 - 280945527051.0
potassium channel proteinD515_01831Not AvailableNegative2809452 - 281066044413.5
thiamin-phosphate pyrophosphorylaseD515_01832Not AvailableNegative2810789 - 281143022799.4

Displaying genes 2621 – 2630 of 5034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.