Grimontia indica strain AK16

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia indica strain AK16 is a Gram-negative bacterium characterized by a single replicon. This strain is cataloged under the accession number ANFM00000000.2. The Gram-negative classification indicates that Grimontia indica possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which are important for its structural integrity and can influence its interactions with the environment and other organisms. The presence of only one replicon suggests a streamlined genomic organization, which may affect its replication and genetic stability. Understanding the traits of Grimontia indica strain AK16 contributes to our knowledge of microbial diversity and ecology. The unique characteristics of this strain could have implications for its ecological role, particularly in environments where it resides. As a Gram-negative bacterium, it may play a significant role in nutrient cycling or as a participant in microbial communities, potentially influencing the dynamics of those ecosystems. Further research into this strain could provide insights into its ecological interactions and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia indica
Strainstrain AK16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia indica strain AK16 contig109, whole genome shotgun

Gene Summary

Adenine Count

1423467 bp

Thymine Count

1426370 bp

Guanine Count

1363418 bp

Cytosine Count

1342335 bp

Genome Length

5555590 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-dependent transporterD515_01179Not AvailableNegative2345436 - 234629329802.0
quinolinate synthetaseD515_01180Not AvailableNegative2346365 - 234736636351.8
tpr repeat containing exported proteinD515_01181Not AvailableNegative2347582 - 234831627089.9
18k peptidoglycan-associated outer membrane lipoproteinD515_01182Not AvailableNegative2348332 - 234885318691.8
tolb protein precursorD515_01183Not AvailableNegative2348887 - 235020648521.0
tola proteinD515_01184Not AvailableNegative2350252 - 235135841888.4
tol biopolymer transport system, tolr proteinD515_01185Not AvailableNegative2351355 - 235180115982.5
mota/tolq/exbb proton channel family proteinD515_01186Not AvailableNegative2351805 - 235249125057.7
4-hydroxybenzoyl-coa thioesterase family active site proteinD515_01187Not AvailableNegative2352481 - 23527088356.11
protein ybgeD515_01188Not AvailableNegative2353061 - 235334510585.5

Displaying genes 2211 – 2220 of 5034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.