Grimontia indica strain AK16

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia indica strain AK16 is a Gram-negative bacterium characterized by a single replicon. This strain is cataloged under the accession number ANFM00000000.2. The Gram-negative classification indicates that Grimontia indica possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which are important for its structural integrity and can influence its interactions with the environment and other organisms. The presence of only one replicon suggests a streamlined genomic organization, which may affect its replication and genetic stability. Understanding the traits of Grimontia indica strain AK16 contributes to our knowledge of microbial diversity and ecology. The unique characteristics of this strain could have implications for its ecological role, particularly in environments where it resides. As a Gram-negative bacterium, it may play a significant role in nutrient cycling or as a participant in microbial communities, potentially influencing the dynamics of those ecosystems. Further research into this strain could provide insights into its ecological interactions and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia indica
Strainstrain AK16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia indica strain AK16 contig109, whole genome shotgun

Gene Summary

Adenine Count

1423467 bp

Thymine Count

1426370 bp

Guanine Count

1363418 bp

Cytosine Count

1342335 bp

Genome Length

5555590 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-aspartate oxidaseD515_00506Not AvailableNegative1635370 - 163698359755.8
rna polymerase sigma factor rpoeD515_00507Not AvailablePositive1637410 - 163798821678.7
sigma factor rpoe negative regulatory protein rseaD515_00508Not AvailablePositive1638019 - 163863622204.1
sigma factor rpoe negative regulatory protein rseb precursorD515_00509Not AvailablePositive1638641 - 163961535852.0
sigma factor rpoe regulatory protein rsecD515_00510Not AvailablePositive1639612 - 164010617023.8
translation elongation factor lepaD515_00511Not AvailablePositive1640183 - 164197965905.2
signal peptidase iD515_00512Not AvailablePositive1642011 - 164291033469.1
ribonuclease iiiD515_00513Not AvailablePositive1642922 - 164359624837.6
gtp-binding protein eraD515_00514Not AvailablePositive1643593 - 164450734934.9
dna recombination and repair protein recoD515_00515Not AvailablePositive1644540 - 164525326536.1

Displaying genes 1541 – 1550 of 5034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.