Nitratireductor pacificus pht-3B

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Nitratireductor

Description

Nitratireductor pacificus pht-3B is a Gram-negative bacterium characterized by its rod shape. This organism exhibits a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The reference accession for Nitratireductor pacificus pht-3B is AMRM00000000.1, which serves as a point of access for further genomic studies and comparisons with related species. This bacterium is part of the broader ecological framework where denitrification occurs, a critical process in the nitrogen cycle. As a denitrifier, Nitratireductor pacificus pht-3B likely plays a role in converting nitrate to nitrogen gas, thus contributing to the reduction of nitrate levels in its environment. This function is significant in agricultural and aquatic systems, where excess nitrates can lead to issues such as eutrophication. Understanding the characteristics of Nitratireductor pacificus pht-3B enhances our knowledge of microbial diversity and functional roles in nutrient cycling. The study of such microorganisms is crucial for developing strategies to manage and mitigate environmental impacts associated with nitrogen compounds.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusNitratireductor
SpeciesNitratireductor pacificus
Strainpht-3B

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitratireductor pacificus pht-3B contig51, whole genome shotgun

Gene Summary

Adenine Count

767576 bp

Thymine Count

772751 bp

Guanine Count

1461171 bp

Cytosine Count

1464707 bp

Genome Length

4466205 bp

Protein-coding Genes

4145 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon-monoxide dehydrogenase small subunit, coxs-like proteinNA2_01539Not AvailablePositive339994 - 34047316967.5
xanthine dehydrogenase, molybdenum binding subunit apoproteinNA2_01544Not AvailablePositive340487 - 34285083911.3
xanthine dehydrogenaseNA2_01549Not AvailablePositive342862 - 34365926688.8
diguanylate cyclaseNA2_01554Not AvailableNegative343709 - 34492644226.0
hypothetical proteinNA2_01559Not AvailablePositive345205 - 34594825648.1
d-amino acid dehydrogenase small subunitNA2_01564Not AvailablePositive346292 - 34754544725.8
sugar diacid utilization regulatorNA2_01569Not AvailableNegative347564 - 34912958588.8
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylaseNA2_01574Not AvailablePositive349337 - 35050341696.9
trap dicarboxylate family transporter subunit dctpNA2_01579Not AvailablePositive350522 - 35151436186.2
trap dicarboxylate family transporter subunit dctqNA2_01584Not AvailablePositive351573 - 35207318385.6

Displaying genes 411 – 420 of 4249 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.