Corynebacterium durum F0235

rodmicroaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium durum F0235 is a Gram-positive, non-motile bacterium characterized by its rod-shaped morphology. This organism is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. Notably, C. durum F0235 is non-spore-forming, which suggests a reliance on other survival strategies in its environment. The genome of C. durum F0235 is represented by a single replicon, as indicated by its accession number AMEM00000000.1. This genomic structure may have implications for the bacterium’s genetic stability and adaptability, allowing for efficient replication in its ecological niche. Ecologically, the traits of C. durum F0235 suggest it may inhabit environments where oxygen levels are lower than atmospheric concentrations, potentially including soil, plant surfaces, or other niches where microaerophilic conditions prevail. The absence of motility and spore formation could affect its distribution and survival, relying on passive mechanisms for movement and persistence in its habitat. Overall, the characteristics of Corynebacterium durum F0235 underscore its adaptation to specific microenvironments, contributing to our understanding of microbial diversity and ecological roles within various ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium durum
StrainF0235

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium durum F0235
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium durum F0235 C_durum-1.0_Cont226.1, whole genome

Gene Summary

Adenine Count

609702 bp

Thymine Count

602661 bp

Guanine Count

791964 bp

Cytosine Count

804769 bp

Genome Length

2809096 bp

Protein-coding Genes

2823 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-sulfur cluster assembly accessory proteinHMPREF9997_01709Not AvailableNegative1673107 - 167345111997.1
hypothetical proteinHMPREF9997_01710Not AvailablePositive1673638 - 167433326499.0
putative adenosylcobalamin biosynthesis protein cobuHMPREF9997_01711Not AvailablePositive1674337 - 167486118902.6
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseHMPREF9997_01712Not AvailablePositive1674874 - 167591436165.3
cobalamin-5-phosphate synthaseHMPREF9997_01713Not AvailablePositive1675922 - 167672227949.6
branched-chain-amino-acid transaminaseHMPREF9997_01714Not AvailableNegative1676754 - 167786039933.4
cytosol aminopeptidase family, catalytic domain proteinHMPREF9997_01715Not AvailablePositive1678014 - 167942948433.5
oxidoreductase, short chain dehydrogenase/reductase family proteinHMPREF9997_01716Not AvailablePositive1679439 - 168011323111.5
hypothetical proteinHMPREF9997_01717Not AvailableNegative1680126 - 168051514959.9
2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferaseHMPREF9997_01718Not AvailablePositive1680645 - 168267570050.4

Displaying genes 1711 – 1720 of 2877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

409 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 409 metabolites

Health Effects

No health effects information available for this bacterium.