Actinomyces sp. ICM58

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. ICM58 is characterized by having a single replicon, which is indicative of a streamlined genetic organization. The organism's genome can be referenced through the accession number ALIY00000000.1, providing a basis for further genetic and functional studies. Actinomyces species are known for their role in various ecological niches, particularly in the human microbiome and soil environments. They are typically involved in the decomposition of organic materials and have been studied for their potential applications in biotechnology and medicine. Their presence in the microbiome is often associated with health and disease states, making them significant in the study of microbial ecology. The single replicon trait suggests a potential for efficient replication and maintenance of genetic information, which may enhance adaptability to changing environmental conditions. This could be crucial for survival in diverse habitats, as Actinomyces species often inhabit complex ecosystems where competition for resources is high. In summary, the unique genomic structure represented by the single replicon of Actinomyces sp. ICM58, along with its ecological roles, underscores its importance in microbial communities and highlights the need for further research to fully understand its functions and contributions to its habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. ICM58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. ICM58
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. ICM58 ctg120007878522, whole genome shotgun

Gene Summary

Adenine Count

401511 bp

Thymine Count

398951 bp

Guanine Count

796902 bp

Cytosine Count

793130 bp

Genome Length

2390495 bp

Protein-coding Genes

2117 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseHMPREF1138_1773Not AvailableNegative538366 - 53944838119.9
shikimate kinaseHMPREF1138_1774Not AvailableNegative539445 - 53995417758.2
chorismate synthase domain proteinHMPREF1138_1775Not AvailableNegative539951 - 5402038712.44
abc transporter, atp-binding domain proteinHMPREF1138_1050Not AvailableNegative540204 - 54053811617.2
putative protein crcbHMPREF1138_1051Not AvailableNegative541183 - 54155112343.1
crcb-like proteinHMPREF1138_1052Not AvailableNegative541548 - 54199714839.0
putative glutamyl-queuosine trna(asp) synthetaseHMPREF1138_1053Not AvailablePositive542094 - 54300832371.2
Trna-argNot AvailableNot AvailablePositive543145 - 543217Not Available
ybak/proline--trna ligase associated domain proteinHMPREF1138_1056Not AvailablePositive543584 - 54415919815.9
hypothetical proteinHMPREF1138_0074Not AvailablePositive544985 - 54586632167.1

Displaying genes 491 – 500 of 2171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.