Actinomyces sp. ICM58

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. ICM58 is characterized by having a single replicon, which is indicative of a streamlined genetic organization. The organism's genome can be referenced through the accession number ALIY00000000.1, providing a basis for further genetic and functional studies. Actinomyces species are known for their role in various ecological niches, particularly in the human microbiome and soil environments. They are typically involved in the decomposition of organic materials and have been studied for their potential applications in biotechnology and medicine. Their presence in the microbiome is often associated with health and disease states, making them significant in the study of microbial ecology. The single replicon trait suggests a potential for efficient replication and maintenance of genetic information, which may enhance adaptability to changing environmental conditions. This could be crucial for survival in diverse habitats, as Actinomyces species often inhabit complex ecosystems where competition for resources is high. In summary, the unique genomic structure represented by the single replicon of Actinomyces sp. ICM58, along with its ecological roles, underscores its importance in microbial communities and highlights the need for further research to fully understand its functions and contributions to its habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. ICM58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. ICM58
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. ICM58 ctg120007878522, whole genome shotgun

Gene Summary

Adenine Count

401511 bp

Thymine Count

398951 bp

Guanine Count

796902 bp

Cytosine Count

793130 bp

Genome Length

2390495 bp

Protein-coding Genes

2117 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase, large subunitHMPREF1138_1763Not AvailableNegative528508 - 531807118392.0
carbamoyl-phosphate synthase, small subunitHMPREF1138_1764Not AvailableNegative531807 - 53299442242.9
dihydro-orotase-like proteinHMPREF1138_1765Not AvailableNegative532991 - 53431046502.6
aspartate carbamoyltransferaseHMPREF1138_1766Not AvailableNegative534303 - 53528935128.0
phosphoribosyl transferase domain proteinHMPREF1138_1767Not AvailableNegative535293 - 53585620061.3
hypothetical proteinHMPREF1138_1768Not AvailableNegative536158 - 5363255990.21
pf10006 family proteinHMPREF1138_1769Not AvailablePositive536344 - 5365176338.75
transcription antitermination factor nusbHMPREF1138_1770Not AvailableNegative536619 - 53725723226.3
translation elongation factor pHMPREF1138_1771Not AvailableNegative537257 - 53782020681.5
shikimate kinaseHMPREF1138_1772Not AvailableNegative537845 - 53836318020.5

Displaying genes 481 – 490 of 2171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.