Actinomyces sp. ICM58

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. ICM58 is characterized by having a single replicon, which is indicative of a streamlined genetic organization. The organism's genome can be referenced through the accession number ALIY00000000.1, providing a basis for further genetic and functional studies. Actinomyces species are known for their role in various ecological niches, particularly in the human microbiome and soil environments. They are typically involved in the decomposition of organic materials and have been studied for their potential applications in biotechnology and medicine. Their presence in the microbiome is often associated with health and disease states, making them significant in the study of microbial ecology. The single replicon trait suggests a potential for efficient replication and maintenance of genetic information, which may enhance adaptability to changing environmental conditions. This could be crucial for survival in diverse habitats, as Actinomyces species often inhabit complex ecosystems where competition for resources is high. In summary, the unique genomic structure represented by the single replicon of Actinomyces sp. ICM58, along with its ecological roles, underscores its importance in microbial communities and highlights the need for further research to fully understand its functions and contributions to its habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. ICM58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. ICM58
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. ICM58


Gene Summary

Adenine Count

401511 bp

Thymine Count

398951 bp

Guanine Count

796902 bp

Cytosine Count

793130 bp

Genome Length

2390495 bp

Protein-coding Genes

2117 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonuclease noti domain proteinHMPREF1138_0771Not AvailableNegative32275 - 3279919473.5
dna methylase family proteinHMPREF1138_0772Not AvailableNegative33116 - 3404234264.1
5s ribosomal rnaNot AvailableNot AvailablePositive34946 - 35062Not Available
gtp-binding protein ychfHMPREF1138_0773Not AvailableNegative34199 - 3528139058.6
hypothetical proteinHMPREF1138_0774Not AvailableNegative35358 - 3666847943.4
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseHMPREF1138_0775Not AvailableNegative36759 - 3782638324.1
nad(p)-binding rossmann-like domain proteinHMPREF1138_0379Not AvailableNegative37982 - 382468713.47
uroporphyrinogen decarboxylaseHMPREF1138_0380Not AvailableNegative38243 - 3934038858.4
glutamyl-trnaglu reductase, n-terminal domain proteinHMPREF1138_0381Not AvailablePositive39582 - 3998014594.5
methionine synthase, vitamin-b12 independentHMPREF1138_0678Not AvailableNegative40016 - 4120943729.0

Displaying genes 31 – 40 of 2171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.