Actinomyces sp. ICM39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. ICM39 is characterized by possessing a single replicon, indicating a streamlined genomic structure. This attribute may contribute to its adaptability and efficiency in various environments. The genome of Actinomyces sp. ICM39 is represented in the accession ALCB00000000.1, which serves as a reference for further genomic analysis and understanding of its biological functions. Actinomyces species are typically known for their role in the microbiota of humans and other animals, often associated with the oral cavity and gastrointestinal tract. They are generally considered beneficial microorganisms, participating in the breakdown of complex carbohydrates and contributing to the maintenance of a healthy microbial balance. The ecological significance of Actinomyces sp. ICM39 may lie in its interactions within its habitat, potentially influencing nutrient cycling and the overall health of its microbial community. By studying this organism further, researchers could gain insights into the functional roles of Actinomyces in various ecosystems and their potential applications in biotechnology or medicine, particularly in relation to their metabolic capabilities and symbiotic relationships with host organisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. ICM39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. ICM39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. ICM39


Gene Summary

Adenine Count

394442 bp

Thymine Count

387645 bp

Guanine Count

738624 bp

Cytosine Count

746944 bp

Genome Length

2267656 bp

Protein-coding Genes

1958 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine o-acetyltransferaseHMPREF1137_1689Not AvailablePositive633517 - 63416122693.7
fr47-like proteinHMPREF1137_1690Not AvailablePositive634247 - 63473817522.5
formamidopyrimidine-dna glycosylase h2th domain proteinHMPREF1137_1691Not AvailableNegative634797 - 63583438064.2
putative leucine--trna ligaseHMPREF1137_1692Not AvailableNegative635841 - 638771108042.0
scavenger mrna decapping enzymeHMPREF1137_1693Not AvailablePositive638878 - 63934216177.2
iron dependent repressor, metal binding/dimerization domain proteinHMPREF1137_1694Not AvailableNegative639463 - 64013124079.3
Trna-lysNot AvailableNot AvailablePositive640277 - 640349Not Available
Trna-lysNot AvailableNot AvailablePositive640384 - 640459Not Available
dna polymerase iii, subunit gamma and tauHMPREF1137_2003Not AvailablePositive640743 - 64198044262.6
hypothetical proteinHMPREF1137_0487Not AvailableNegative643699 - 6438304383.31

Displaying genes 551 – 560 of 2011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.