Actinomyces sp. ICM39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. ICM39 is characterized by possessing a single replicon, indicating a streamlined genomic structure. This attribute may contribute to its adaptability and efficiency in various environments. The genome of Actinomyces sp. ICM39 is represented in the accession ALCB00000000.1, which serves as a reference for further genomic analysis and understanding of its biological functions. Actinomyces species are typically known for their role in the microbiota of humans and other animals, often associated with the oral cavity and gastrointestinal tract. They are generally considered beneficial microorganisms, participating in the breakdown of complex carbohydrates and contributing to the maintenance of a healthy microbial balance. The ecological significance of Actinomyces sp. ICM39 may lie in its interactions within its habitat, potentially influencing nutrient cycling and the overall health of its microbial community. By studying this organism further, researchers could gain insights into the functional roles of Actinomyces in various ecosystems and their potential applications in biotechnology or medicine, particularly in relation to their metabolic capabilities and symbiotic relationships with host organisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. ICM39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. ICM39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. ICM39


Gene Summary

Adenine Count

394442 bp

Thymine Count

387645 bp

Guanine Count

738624 bp

Cytosine Count

746944 bp

Genome Length

2267656 bp

Protein-coding Genes

1958 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
export membrane protein secdHMPREF1137_0033Not AvailableNegative1660764 - 166272568917.3
preprotein translocase subunitHMPREF1137_0034Not AvailableNegative1662752 - 166321017244.3
holliday junction dna helicase ruvbHMPREF1137_0035Not AvailableNegative1663346 - 166439837405.0
holliday junction dna helicase ruvaHMPREF1137_0036Not AvailableNegative1664391 - 166499620564.9
crossover junction endodeoxyribonuclease ruvcHMPREF1137_0037Not AvailableNegative1665052 - 166568121930.5
pyridoxal 5'-phosphate synthase, glutaminase subunit pdx2HMPREF1137_0038Not AvailableNegative1665681 - 166627420973.1
pyridoxal 5'-phosphate synthase, synthase subunit pdx1HMPREF1137_0039Not AvailableNegative1666268 - 166717031979.5
dna-binding regulatory protein, yebc/pmpr familyHMPREF1137_0040Not AvailableNegative1667173 - 166793426982.4
histidine phosphatase superfamily (branch 1) domain proteinHMPREF1137_0041Not AvailableNegative1668083 - 166856517253.2
hypothetical proteinHMPREF1137_0042Not AvailablePositive1668598 - 16688439120.52

Displaying genes 1461 – 1470 of 2011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.