Rhodovulum sp. PH10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sp. PH10 is a Gram-negative bacterium primarily found in mangrove forest soil. This organism is characterized by having a single replicon, which is significant for its genetic stability and replication. The specific accession number for Rhodovulum sp. PH10 is AKZI00000000.1, which provides a reference for researchers interested in its genetic makeup. The habitat of Rhodovulum sp. PH10, specifically in mangrove ecosystems, suggests its potential role in these unique environments. Mangrove forests are known for their rich biodiversity and complex interactions among various microbial communities. The presence of Rhodovulum sp. PH10 in such a habitat indicates that it may contribute to the nutrient cycling and overall health of the soil microbiome in mangrove ecosystems. Given that Rhodovulum species are often involved in processes such as photosynthesis and nitrogen fixation, it can be inferred that Rhodovulum sp. PH10 may play a role in primary production and nutrient availability in its habitat. This highlights the ecological importance of Rhodovulum sp. PH10, as it could be integral to sustaining the productivity and ecological balance of mangrove forests. Understanding its specific functions and interactions within this environment could provide deeper insights into the dynamics of mangrove soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sp. PH10
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove forest; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sp. PH10 contig273, whole genome shotgun sequence.

Gene Summary

Adenine Count

742312 bp

Thymine Count

741966 bp

Guanine Count

1670415 bp

Cytosine Count

1676739 bp

Genome Length

4831432 bp

Protein-coding Genes

4451 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA33M_1271Not AvailablePositive4543609 - 454404315716.0
nitrogenase femo-cofactor synthesis fes core scaffold and assembly protein nifbA33M_1272Not AvailablePositive4544083 - 454556453123.2
4fe-4s ferredoxin, nitrogenase-associatedA33M_1273Not AvailablePositive4545668 - 45458566494.93
lrv (fes)4 cluster domain protein clustered with nitrogenase cofactor synthesisA33M_1274Not AvailablePositive4545876 - 454670930398.5
nifz proteinA33M_1275Not AvailablePositive4546693 - 454700411510.8
nift proteinA33M_1276Not AvailablePositive4547001 - 45472107877.76
hypothetical proteinA33M_1277Not AvailablePositive4547222 - 454822335888.8
hypothetical proteinA33M_1278Not AvailablePositive4550099 - 455087828182.2
d-3-phosphoglycerate dehydrogenaseA33M_1279Not AvailablePositive4550901 - 455185433854.0
protoporphyrin ix mg-chelatase subunit dA33M_1280Not AvailableNegative4552000 - 455271625405.8

Displaying genes 4321 – 4330 of 4545 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.