Rhodovulum sp. PH10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sp. PH10 is a Gram-negative bacterium primarily found in mangrove forest soil. This organism is characterized by having a single replicon, which is significant for its genetic stability and replication. The specific accession number for Rhodovulum sp. PH10 is AKZI00000000.1, which provides a reference for researchers interested in its genetic makeup. The habitat of Rhodovulum sp. PH10, specifically in mangrove ecosystems, suggests its potential role in these unique environments. Mangrove forests are known for their rich biodiversity and complex interactions among various microbial communities. The presence of Rhodovulum sp. PH10 in such a habitat indicates that it may contribute to the nutrient cycling and overall health of the soil microbiome in mangrove ecosystems. Given that Rhodovulum species are often involved in processes such as photosynthesis and nitrogen fixation, it can be inferred that Rhodovulum sp. PH10 may play a role in primary production and nutrient availability in its habitat. This highlights the ecological importance of Rhodovulum sp. PH10, as it could be integral to sustaining the productivity and ecological balance of mangrove forests. Understanding its specific functions and interactions within this environment could provide deeper insights into the dynamics of mangrove soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sp. PH10
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove forest; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sp. PH10 contig273, whole genome shotgun sequence.

Gene Summary

Adenine Count

742312 bp

Thymine Count

741966 bp

Guanine Count

1670415 bp

Cytosine Count

1676739 bp

Genome Length

4831432 bp

Protein-coding Genes

4451 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase iron-sulfur subunitA33M_3519Not AvailablePositive219957 - 22047217928.7
xanthine dehydrogenaseA33M_3520Not AvailablePositive220453 - 22185950881.3
xanthine dehydrogenaseA33M_3521Not AvailablePositive221889 - 22287534634.2
transcriptional regulator, marr familyA33M_3522Not AvailableNegative223053 - 22360119104.8
high-affinity branched-chain amino acid transport system permease protein livhA33M_3523Not AvailableNegative223835 - 22470731106.8
abc transporter permease proteinA33M_3524Not AvailableNegative224704 - 22566634641.1
branched-chain amino acid transport atp-binding protein livfA33M_3525Not AvailableNegative225887 - 22657625026.5
branched-chain amino acid transport atp-binding protein livgA33M_3526Not AvailableNegative226573 - 22737029829.4
extracellular ligand-binding receptorA33M_3527Not AvailableNegative227498 - 22865541733.1
peptidase m24A33M_3528Not AvailableNegative229010 - 23043153624.4

Displaying genes 281 – 290 of 4545 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.