Leptospira noguchii str. 2001034031

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Leptospiria

Order

Leptospirales

Family

Leptospiraceae

Genus

Leptospira

Description

Leptospira noguchii str. 2001034031 is a noteworthy strain of the genus Leptospira, characterized by the presence of flagella, which are crucial for its motility. This feature allows the organism to navigate through various environments, which is significant for its survival and pathogenicity. The strain is defined by a single replicon, indicating a streamlined genetic structure that may influence its adaptability and evolutionary potential. The accession number for this particular strain is AKXB00000000.2, which allows for further reference and investigation within genomic databases. The presence of flagella in Leptospira noguchii str. 2001034031 suggests that it is likely to exhibit a motile lifestyle, which can enhance its ability to colonize various ecological niches. This motility is particularly relevant in the context of transmission dynamics, as it may facilitate the organism's spread in aquatic environments, where it is often found. Ecologically, Leptospira species, including L. noguchii, are typically associated with water sources and can be found in environments contaminated with animal urine. This highlights the importance of understanding their motility and genetic characteristics, as they can impact public health, particularly in areas where leptospirosis is endemic. Understanding the biology and ecology of L. noguchii str. 2001034031 could provide insights into its role within the ecosystem and its potential implications for human and animal health.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassLeptospiria
OrderLeptospirales
FamilyLeptospiraceae
GenusLeptospira
SpeciesLeptospira noguchii
Strain2001034031

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Leptospira noguchii str. 2001034031
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospira noguchii str. 2001034031 ctg7180000007041, whole genome

Gene Summary

Adenine Count

1591794 bp

Thymine Count

1583108 bp

Guanine Count

879307 bp

Cytosine Count

884591 bp

Genome Length

4938803 bp

Protein-coding Genes

4755 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain proteinLEP1GSC024_1421Not AvailableNegative3213366 - 321449342688.5
Trna-metNot AvailableNot AvailablePositive3214618 - 3214690Not Available
hypothetical proteinLEP1GSC024_1423Not AvailablePositive3215214 - 321549511174.9
pyrroline-5-carboxylate reductaseLEP1GSC024_1424Not AvailableNegative3215476 - 321624927673.6
pyridoxal phosphate enzyme, yggs familyLEP1GSC024_1425Not AvailableNegative3216251 - 321691925267.7
hypothetical proteinLEP1GSC024_1426Not AvailableNegative3216924 - 321763727992.7
flagellar filament outer layer protein flaaLEP1GSC024_1427Not AvailablePositive3217731 - 321847429075.1
haloacid dehalogenase-like hydrolaseLEP1GSC024_1428Not AvailableNegative3218446 - 321906324518.2
3-deoxy-d-manno-octulosonic-acid transferaseLEP1GSC024_1429Not AvailablePositive3219070 - 322032647814.3
hypothetical proteinLEP1GSC024_1430Not AvailablePositive3220687 - 322099812369.8

Displaying genes 3171 – 3180 of 4823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.