Helicobacter pylori Hp H-43

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp H-43 is a Gram-negative bacterium characterized by its spiral shape (spirilla) and microaerophilic oxygen requirement, thriving optimally at a temperature of 37°C within a mesophilic range. The organism is host-associated, indicating its primary habitat is within a host organism, where it exists in single-cell arrangements. Hp H-43 exhibits a unique biotic relationship, being categorized as free-living, despite its close association with host environments. The bacterium possesses flagella, which facilitate its motility; however, it is noted that this strain does not exhibit mobility in the traditional sense. This suggests that while it has the potential for movement, its ecological niche may limit its necessity to do so extensively. The strain is characterized by a single replicon and contains two membranes, a trait typical of Gram-negative bacteria. The accession number for this strain is AKOO00000000.1, which provides a reference for further genomic studies. From a biological or ecological perspective, the microaerophilic nature of Hp H-43 suggests a specialized adaptation to low-oxygen environments, such as the gastric mucosa of its host. This adaptation likely plays a crucial role in its ability to colonize and persist in particular ecological niches, highlighting the intricate relationships between microbial organisms and their environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp H-43

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp H-43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp H-43 HpH_43.contig.11_1, whole genome

Gene Summary

Adenine Count

487933 bp

Thymine Count

490749 bp

Guanine Count

318566 bp

Cytosine Count

310417 bp

Genome Length

1607665 bp

Protein-coding Genes

1592 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb8HPHPH43_0011Not AvailablePositive7477 - 822028854.7
comb9 competence proteinHPHPH43_0012Not AvailablePositive8220 - 920337789.5
type iv secretion system protein virb10HPHPH43_0013Not AvailablePositive9196 - 1033242165.3
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseHPHPH43_0014Not AvailablePositive10403 - 1181553291.1
gdp-mannose 4,6-dehydrataseHPHPH43_0015Not AvailablePositive11850 - 1299543914.5
gdp-l-fucose synthaseHPHPH43_0016Not AvailablePositive12988 - 1392034890.6
hydrogenase expression/formation protein hypeHPHPH43_0017Not AvailableNegative14214 - 1521236469.6
carbamoyltransferase hypfHPHPH43_0018Not AvailableNegative15215 - 1746784691.4
putative agmatine deiminaseHPHPH43_0019Not AvailableNegative17464 - 1845637537.1
type ii adenine methyltransferaseHPHPH43_0020Not AvailableNegative18508 - 1878910591.1

Displaying genes 11 – 20 of 1635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.