Helicobacter pylori Hp H-43

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp H-43 is a Gram-negative bacterium characterized by its spiral shape (spirilla) and microaerophilic oxygen requirement, thriving optimally at a temperature of 37°C within a mesophilic range. The organism is host-associated, indicating its primary habitat is within a host organism, where it exists in single-cell arrangements. Hp H-43 exhibits a unique biotic relationship, being categorized as free-living, despite its close association with host environments. The bacterium possesses flagella, which facilitate its motility; however, it is noted that this strain does not exhibit mobility in the traditional sense. This suggests that while it has the potential for movement, its ecological niche may limit its necessity to do so extensively. The strain is characterized by a single replicon and contains two membranes, a trait typical of Gram-negative bacteria. The accession number for this strain is AKOO00000000.1, which provides a reference for further genomic studies. From a biological or ecological perspective, the microaerophilic nature of Hp H-43 suggests a specialized adaptation to low-oxygen environments, such as the gastric mucosa of its host. This adaptation likely plays a crucial role in its ability to colonize and persist in particular ecological niches, highlighting the intricate relationships between microbial organisms and their environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp H-43

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp H-43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp H-43 HpH_43.contig.11_1, whole genome

Gene Summary

Adenine Count

487933 bp

Thymine Count

490749 bp

Guanine Count

318566 bp

Cytosine Count

310417 bp

Genome Length

1607665 bp

Protein-coding Genes

1592 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHPHPH43_1360Not AvailablePositive1338116 - 13382776057.63
site-specific dna-methyltransferaseHPHPH43_1361Not AvailableNegative1338324 - 133892623415.3
site-specific dna-methyltransferaseHPHPH43_1362Not AvailableNegative1339087 - 133995033508.4
methylaseHPHPH43_1363Not AvailablePositive1340200 - 134161655689.5
modification methylase kpniHPHPH43_1364Not AvailablePositive1341770 - 134266633986.7
dead/deah box helicase family proteinHPHPH43_1365Not AvailablePositive1342676 - 134417258417.2
type iii restriction enzyme r proteinHPHPH43_1366Not AvailablePositive1344215 - 134559153905.8
rod shape-determining protein mrecHPHPH43_1367Not AvailableNegative1345646 - 134639228036.0
rod shape-determining proteinHPHPH43_1368Not AvailableNegative1346396 - 134743937341.9
atp-dependent clp protease, atp-binding subunit clpxHPHPH43_1369Not AvailableNegative1347482 - 134882850648.7

Displaying genes 1361 – 1370 of 1635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.