Helicobacter pylori Hp H-43

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp H-43 is a Gram-negative bacterium characterized by its spiral shape (spirilla) and microaerophilic oxygen requirement, thriving optimally at a temperature of 37°C within a mesophilic range. The organism is host-associated, indicating its primary habitat is within a host organism, where it exists in single-cell arrangements. Hp H-43 exhibits a unique biotic relationship, being categorized as free-living, despite its close association with host environments. The bacterium possesses flagella, which facilitate its motility; however, it is noted that this strain does not exhibit mobility in the traditional sense. This suggests that while it has the potential for movement, its ecological niche may limit its necessity to do so extensively. The strain is characterized by a single replicon and contains two membranes, a trait typical of Gram-negative bacteria. The accession number for this strain is AKOO00000000.1, which provides a reference for further genomic studies. From a biological or ecological perspective, the microaerophilic nature of Hp H-43 suggests a specialized adaptation to low-oxygen environments, such as the gastric mucosa of its host. This adaptation likely plays a crucial role in its ability to colonize and persist in particular ecological niches, highlighting the intricate relationships between microbial organisms and their environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp H-43

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp H-43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp H-43 HpH_43.contig.11_1, whole genome

Gene Summary

Adenine Count

487933 bp

Thymine Count

490749 bp

Guanine Count

318566 bp

Cytosine Count

310417 bp

Genome Length

1607665 bp

Protein-coding Genes

1592 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenaseHPHPH43_1593Not AvailablePositive1567743 - 156866633651.6
putative trna threonylcarbamoyladenosine biosynthesis protein gcpHPHPH43_1594Not AvailablePositive1568730 - 156975237748.0
flagellar basal-body rod protein flgfHPHPH43_1595Not AvailablePositive1569930 - 157071828049.0
flagellar basal body rod protein flggHPHPH43_1596Not AvailableNegative1570817 - 157114611811.5
hypothetical proteinHPHPH43_1597Not AvailableNegative1571200 - 157171819408.3
flagellar basal body rod protein flggHPHPH43_1598Not AvailableNegative1572102 - 15722425213.7
hypothetical proteinHPHPH43_1599Not AvailableNegative1572327 - 157308828462.3
hypothetical proteinHPHPH43_1600Not AvailableNegative1573235 - 15733725009.25
hypothetical proteinHPHPH43_1601Not AvailableNegative1573338 - 15734935902.17
transcription antitermination factor nusbHPHPH43_1602Not AvailableNegative1574104 - 157452015491.9

Displaying genes 1591 – 1600 of 1635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.