Helicobacter pylori Hp H-29

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp H-29 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. It typically exists in a host-associated environment, indicating a specific relationship with its host. This organism is classified as mesophilic, with an optimal growth temperature of 37 degrees Celsius, which aligns with the typical body temperature of its mammalian hosts. Hp H-29 has a single replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. The cell arrangement is primarily in singles, and it exhibits a free-living biotic relationship, suggesting it may survive independently under certain conditions, although it is commonly associated with its host. The presence of flagella enables motility, which is an important trait for navigating the gastrointestinal tract of the host, where it can colonize and potentially lead to various gastrointestinal diseases, including gastritis and peptic ulcers. Understanding the traits of Hp H-29, including its habitat and physiological characteristics, is crucial for comprehending its role within the microbiome and its impact on human health. In conclusion, the adaptation of Hp H-29 to a microaerophilic environment and its specific temperature range underscore its specialization for survival in the gastric niche, illustrating the intricate relationships between host organisms and their resident microbiota.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp H-29

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp H-29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp H-29 HpH_29.contig.15_1, whole genome

Gene Summary

Adenine Count

509084 bp

Thymine Count

512249 bp

Guanine Count

327597 bp

Cytosine Count

328677 bp

Genome Length

1677607 bp

Protein-coding Genes

1634 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
competence proteinHPHPH29_0126Not AvailablePositive121399 - 12238837983.6
inner membrane proteinHPHPH29_0127Not AvailablePositive122381 - 12351742216.2
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseHPHPH29_0128Not AvailablePositive123587 - 12499953283.9
gdp-mannose 4,6-dehydrataseHPHPH29_0129Not AvailablePositive125040 - 12618543774.4
gdp-l-fucose synthaseHPHPH29_0130Not AvailablePositive126178 - 12711034844.6
hypothetical proteinHPHPH29_0131Not AvailablePositive127231 - 1273624950.23
hypothetical proteinHPHPH29_0132Not AvailableNegative127500 - 12778410807.9
hydrogenase expression/formation protein hypeHPHPH29_0133Not AvailableNegative127958 - 12895636311.3
carbamoyltransferase hypfHPHPH29_0134Not AvailableNegative128959 - 13121184797.7
putative agmatine deiminaseHPHPH29_0135Not AvailableNegative131208 - 13220037573.1

Displaying genes 131 – 140 of 1678 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.