Helicobacter pylori CPY1124

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori CPY1124 is a Gram-negative bacterium characterized by its spiral shape (spirilla) and presence of flagella, which aids in its mobility. This microaerophilic organism thrives in host-associated habitats, where it is typically found in the stomach lining of various hosts. It exhibits a single-cell arrangement and has a mesophilic temperature range, with an optimal growth temperature of 37°C. CPY1124 has a unique cellular structure, comprising two membranes and a single replicon, which is indicative of its evolutionary adaptations. Despite being free-living, it is primarily associated with its host environment, highlighting its specialized niche within the gastrointestinal tract. The presence of flagella is particularly significant, as it allows the bacterium to navigate the viscous environment of the stomach, where it can colonize and potentially cause gastric-related diseases. The microaerophilic nature of CPY1124 suggests that it requires low levels of oxygen for optimal growth, which aligns with its habitat in the oxygen-limited gastric environment. Overall, Helicobacter pylori CPY1124 exemplifies the complex interactions between bacterial species and their host environments, emphasizing the importance of specific adaptations that allow for survival and potential pathogenicity in the gastric milieu. Its accessions, such as AKNJ00000000.1, serve as a reference for further genetic and functional studies within microbiology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainCPY1124

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori CPY1124
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori CPY1124 CPY1124.contig.12_1, whole genome

Gene Summary

Adenine Count

477573 bp

Thymine Count

476907 bp

Guanine Count

306333 bp

Cytosine Count

302384 bp

Genome Length

1563197 bp

Protein-coding Genes

1648 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication-associated protein aHPCPY1124_1692Not AvailablePositive943 - 248458721.8
5s ribosomal rnaNot AvailableNot AvailablePositive943 - 1058Not Available
penicillin-binding protein 2HPCPY1124_0001Not AvailableNegative3320 - 477154937.5
hypothetical proteinHPCPY1124_0002Not AvailableNegative4752 - 519517336.8
ribosome biogenesis gtp-binding protein ysxcHPCPY1124_0003Not AvailableNegative5208 - 583423511.6
lipopolysaccharide transport periplasmic protein lptaHPCPY1124_0004Not AvailableNegative5831 - 638820919.3
hypothetical proteinHPCPY1124_0005Not AvailableNegative6388 - 698122789.0
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseHPCPY1124_0006Not AvailableNegative6956 - 745018137.4
rlpa-like lipoproteinHPCPY1124_0007Not AvailableNegative7447 - 839435580.3
regulatory protein dnirHPCPY1124_0008Not AvailableNegative8394 - 952143543.5

Displaying genes 1 – 10 of 1688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.