Helicobacter pylori CPY1124

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori CPY1124 is a Gram-negative bacterium characterized by its spiral shape (spirilla) and presence of flagella, which aids in its mobility. This microaerophilic organism thrives in host-associated habitats, where it is typically found in the stomach lining of various hosts. It exhibits a single-cell arrangement and has a mesophilic temperature range, with an optimal growth temperature of 37°C. CPY1124 has a unique cellular structure, comprising two membranes and a single replicon, which is indicative of its evolutionary adaptations. Despite being free-living, it is primarily associated with its host environment, highlighting its specialized niche within the gastrointestinal tract. The presence of flagella is particularly significant, as it allows the bacterium to navigate the viscous environment of the stomach, where it can colonize and potentially cause gastric-related diseases. The microaerophilic nature of CPY1124 suggests that it requires low levels of oxygen for optimal growth, which aligns with its habitat in the oxygen-limited gastric environment. Overall, Helicobacter pylori CPY1124 exemplifies the complex interactions between bacterial species and their host environments, emphasizing the importance of specific adaptations that allow for survival and potential pathogenicity in the gastric milieu. Its accessions, such as AKNJ00000000.1, serve as a reference for further genetic and functional studies within microbiology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainCPY1124

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori CPY1124
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori CPY1124 CPY1124.contig.12_1, whole genome

Gene Summary

Adenine Count

477573 bp

Thymine Count

476907 bp

Guanine Count

306333 bp

Cytosine Count

302384 bp

Genome Length

1563197 bp

Protein-coding Genes

1648 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanyl-trna synthetase subunit alphaHPCPY1124_1180Not AvailableNegative1088866 - 108962429719.9
gtp-binding protein lepaHPCPY1124_1181Not AvailableNegative1089639 - 109142966245.5
1-deoxy-d-xylulose-5-phosphate synthaseHPCPY1124_1182Not AvailableNegative1091444 - 109329467484.5
putative flagellar assembly proteinHPCPY1124_1183Not AvailableNegative1093297 - 109406728975.7
flagellar motor switch protein fligHPCPY1124_1184Not AvailableNegative1094060 - 109509138280.3
flagellar m-ring protein flifHPCPY1124_1185Not AvailableNegative1095110 - 109681363656.3
hypothetical proteinHPCPY1124_1186Not AvailableNegative1096857 - 109751924293.6
ctp synthaseHPCPY1124_1187Not AvailablePositive1097776 - 109939260705.6
single-stranded-dna-specific exonuclease recjHPCPY1124_1188Not AvailablePositive1099401 - 110095158391.0
pseudouridine synthaseHPCPY1124_1189Not AvailablePositive1100951 - 110183233677.4

Displaying genes 1181 – 1190 of 1688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.