Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00592 | Not Available | Negative | 609430 - 610269 | 30137.8 |
| putative membrane protein, required for n-linked glycosylation | PMI12_00593 | Not Available | Negative | 610324 - 611232 | 30851.8 |
| dna-binding domain-containing protein, arac-type | PMI12_00594 | Not Available | Negative | 611269 - 612045 | 28697.4 |
| putative phosphohydrolase | PMI12_00595 | Not Available | Negative | 612070 - 612864 | 29290.3 |
| nitroreductase | PMI12_00596 | Not Available | Negative | 612922 - 613593 | 25072.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_00597 | Not Available | Positive | 613717 - 615357 | 60487.8 |
| hypothetical protein | PMI12_00598 | Not Available | Negative | 615719 - 616165 | 15894.0 |
| Trna-met | Not Available | Not Available | Positive | 616567 - 616643 | Not Available |
| von willebrand factor type a-like protein | PMI12_00600 | Not Available | Negative | 616698 - 618212 | 53842.8 |
| rna polymerase sigma factor, sigma-70 family | PMI12_00601 | Not Available | Positive | 618348 - 619013 | 24510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
