Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain protein containing protein | PMI12_05369 | Not Available | Positive | 5645372 - 5645983 | 22760.4 |
| rhs repeat protein | PMI12_05370 | Not Available | Positive | 5646428 - 5646601 | 6645.75 |
| non-ribosomal peptide synthase | PMI12_05371 | Not Available | Negative | 5646602 - 5648004 | 52334.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_05372 | Not Available | Negative | 5648004 - 5648651 | 23506.1 |
| moxr-like atpase | PMI12_05373 | Not Available | Positive | 5648652 - 5649831 | 42398.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05374 | Not Available | Positive | 5649974 - 5650738 | 25534.8 |
| hypothetical protein | PMI12_05375 | Not Available | Positive | 5650735 - 5651625 | 32106.1 |
| acetyl-coa acetyltransferase | PMI12_05376 | Not Available | Positive | 5651746 - 5652428 | 23801.9 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_05377 | Not Available | Positive | 5652517 - 5653764 | 43912.5 |
| acyl-coa dehydrogenase | PMI12_05378 | Not Available | Positive | 5653801 - 5654878 | 38308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
