Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage coat protein b | PMI12_04555 | Not Available | Negative | 4776411 - 4776614 | 6665.3 |
| hypothetical protein | PMI12_04556 | Not Available | Negative | 4776817 - 4777086 | 9980.65 |
| hypothetical protein | PMI12_04557 | Not Available | Negative | 4777089 - 4777409 | 11705.2 |
| Trna-ser | Not Available | Not Available | Positive | 4778607 - 4778699 | Not Available |
| aspartate kinase, monofunctional class | PMI12_04559 | Not Available | Negative | 4778727 - 4779995 | 45474.5 |
| trna(ile)-lysidine synthetase | PMI12_04560 | Not Available | Negative | 4780051 - 4781028 | 35120.9 |
| acetyl-coa carboxylase, carboxyl transferase, alpha subunit | PMI12_04561 | Not Available | Negative | 4781044 - 4782024 | 36631.8 |
| hhh-gpd superfamily base excision dna repair protein | PMI12_04562 | Not Available | Negative | 4782041 - 4782691 | 24303.4 |
| cysteinyl-trna synthetase | PMI12_04563 | Not Available | Negative | 4782709 - 4784085 | 50949.4 |
| tetratricopeptide repeat protein | PMI12_04564 | Not Available | Positive | 4784289 - 4784879 | 21503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
